DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and Su(dx)

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster


Alignment Length:1120 Identity:246/1120 - (21%)
Similarity:392/1120 - (35%) Gaps:341/1120 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GGGEDDQHLPGVSSA-----SGSAAGAVGGRATPEMKRSAVRSLIKRYFHQLQSGCGNANCSNAN 64
            ||.|..|.:.|..||     |.|.|||.|.              ..:.:|||     :.....|:
  Fly    14 GGMEAGQTVNGAGSASPTPTSSSGAGASGS--------------ANQGYHQL-----SVTIEEAS 59

  Fly    65 CASSGKVAP----------------------------------MTPNEVAARAL---QLFSQDAQ 92
            ..::|.:.|                                  :|||......:   ..|.:||.
  Fly    60 LRNNGFLKPNPYVELLIDSKSKRKTDLVKNSYLPKWNEEFTVLITPNSTLHFKVLDHSSFRKDAM 124

  Fly    93 LCEAFTSEANSPQ-------------DVDMLSPNDSSSSSSGSSTSTITSASTTTTTSRQSQSTP 144
            |.|...:.|:..|             |:.:.|.:|:..:.||.                      
  Fly   125 LGERIINLAHILQHYNGRCEFLELTIDLFVTSKSDNRQTKSGE---------------------- 167

  Fly   145 AAVVVPVSSPYLTQSVPQLD-IAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQCRAADSYDR 208
              :|..::...|..|..|:. :||.::.:...:...|::..    ||              :..|
  Fly   168 --LVAILNGLKLDMSKLQIQPVAGQQNGNPPVQAVNPSVVS----DA--------------AAGR 212

  Fly   209 ICHAIGVVFSSVDRLGKSFIRSAEPAASSSLQELLANSPGALNKEQLRTLEGEHDKD-------E 266
            .|...|.|            |:.....|||     .||.|...:..|....|:|.:.       |
  Fly   213 SCMIYGGV------------RARMRLRSSS-----GNSNGGETRSPLPNGGGDHRRSTQAPPVWE 260

  Fly   267 DSTQQVDEQSESAANATATAESVESEAE-PEEEDDDVCSSQSSDTLVDLPGLRRVQRLLFGCQIR 330
            ...||...|.:.......:..:|...|. |::.              ..|.|.|....::|    
  Fly   261 QQQQQSQNQQQPLRMVNGSGAAVPQTAPYPQQP--------------PAPALARPLTQVYG---- 307

  Fly   331 AITEKLTSSVIQL----------------------------------------------SDWVI- 348
            |:.|....:.:.|                                              :.|.| 
  Fly   308 ALPENTQPAAVYLPAGGGAAVGPPGVAGPPIEQPGVGLPVSQSTDPQLQTQPADDEPLPAGWEIR 372

  Fly   349 ---YMR----------TDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQAASAMPVPAQ 400
               |.|          |.||:... |...:::..:....|..:|:..|        .:....|..
  Fly   373 LDQYGRRYYVDHNTRSTYWEKPTP-LPPGWEIRKDGRGRVYYVDHNTR--------KTTWQRPNS 428

  Fly   401 ARLARI--W---AAHCSDQLHSLIAACQQQ-----ITLQVLLDEESMRENESIISVTKVLKIVFY 455
            .||...  |   .||...|.:......|||     :|.||..|:|                    
  Fly   429 ERLMHFQHWQGQRAHVVSQGNQRYLYSQQQQQPTAVTAQVTQDDE-------------------- 473

  Fly   456 ANILASELERPSCRVPLEDRTEAATASGSAAVEDDLFVYNSLLEPHMPKFA--EDQFEKELQVSA 518
                       ....||.|..|       ..::.|..||   ...|..:..  ||...:..:||.
  Fly   474 -----------DALGPLPDGWE-------KKIQSDNRVY---FVNHKNRTTQWEDPRTQGQEVSL 517

  Fly   519 IDCRKPLIPLEEFYNEALSENIQMHHDYLSYKTLAMESEIGS--GHANYFSFMLYAFILTPSTKV 581
            |: ..||.|..|....|..|...:.|:  :.:|...:...|:  |....:.             |
  Fly   518 IN-EGPLPPGWEIRYTAAGERFFVDHN--TRRTTFEDPRPGAPKGAKGVYG-------------V 566

  Fly   582 DALYYDS-RMRMYSERYSSLHSILNNIGQVGQEDNPRPD-LKLTVRRDQLINDALIGLEMVAMSN 644
            ...|..| |.::...||..             :.|..|. :|:||.|..|..|:   ...:....
  Fly   567 PRAYERSFRWKLSQFRYLC-------------QSNALPSHIKITVTRQTLFEDS---YHQIMRLP 615

  Fly   645 PKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETN-NMWFNATPFENG-- 706
            ..:|:::|.:.|.||:|:|.||||:|:|.|:..|:.||.:.:|....:.| ::..|...:.|.  
  Fly   616 AYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDH 680

  Fly   707 -AQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDM 770
             ..|..||..|.:|:|:...:...|.|..|::::....|..|:....|..|.||..:.|   .::
  Fly   681 LQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKD---NNI 742

  Fly   771 EEV-FEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKG 834
            :|. .|..|.:.: :|.|.::.|||..||:...|.:.|||.::.|.:::.:...||||...|.:|
  Fly   743 DECGLELWFSVDF-EVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEG 806

  Fly   835 FEMVTDESPLKLL--FRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPS 897
            |..|.   ||:.|  |...|:|:::||.::.|..:.:.:|:|. .|...|:.:..||..|....:
  Fly   807 FNEVV---PLEWLKYFDERELELILCGMQDVDVEDWQRNTIYR-HYNRNSKQVVWFWQFVRETDN 867

  Fly   898 EDKHKLLEFTTGSARVPVGGLKCL-------RLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREK 955
            |.:.:||:|.||:.||||||...|       |..|.:.|.:: .||.||||||.|.||.|.|.::
  Fly   868 EKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKVGKET-WLPRSHTCFNRLDLPPYKSYDQ 931

  Fly   956 LEERLMKAINYSKGF 970
            |.|:|..||..::||
  Fly   932 LVEKLTFAIEETEGF 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 12/90 (13%)
HECTc 620..971 CDD:238033 118/365 (32%)
HECTc 647..970 CDD:214523 110/336 (33%)
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 22/153 (14%)
WW 364..396 CDD:197736 7/31 (23%)
WW 397..426 CDD:278809 4/36 (11%)
WW 478..509 CDD:197736 10/40 (25%)
WW 522..554 CDD:197736 8/33 (24%)
HECTc 594..946 CDD:238033 116/363 (32%)
HECTc 620..946 CDD:214523 109/334 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446971
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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