DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and CG4238

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001259896.1 Gene:CG4238 / 33377 FlyBaseID:FBgn0031384 Length:977 Species:Drosophila melanogaster


Alignment Length:1112 Identity:223/1112 - (20%)
Similarity:388/1112 - (34%) Gaps:337/1112 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SASGSAAGAVGGRATPEMKRSAVRSLIKRYFHQLQ-----SGCGNANCSNANCASSGKVAPMTPN 77
            :..|....|.||:..|.:|       :|..|.:..     |.||:..       ...::.|:...
  Fly    47 NVGGVMHAATGGKTFPTLK-------VKLCFGESMGISSLSSCGDPE-------RLPELPPLDEQ 97

  Fly    78 EVAARALQL--------FSQDAQLCEAF----TSEANSPQDVDMLSPNDSSSSS---------SG 121
            .:...||.|        :.:|.:|...:    ..|..|.:||..|  .||.:|.         ||
  Fly    98 RLQRAALHLQQKLILREWLKDHRLQHHYQRLLAVEVASLEDVYWL--EDSRASKILGKDWQLWSG 160

  Fly   122 SSTSTITS--------ASTTTTTSRQSQSTPA-----AVVVPVSSPYLTQSVPQLDIAGAEHSSG 173
            :..:..||        |...:|..:.||...|     .:||.||            :||....:.
  Fly   161 ARQNLPTSKAQLDALKAQLWSTVVKSSQHQDAWTWGGMLVVSVS------------VAGLVTLAA 213

  Fly   174 DSEPCTPTLAPV--HS----------LDANSLIAL-------------------------YEQCR 201
            .::   |:|||.  ||          |.||..:..                         |..|.
  Fly   214 MTQ---PSLAPEARHSLLQYVTGKYLLPANCKVQWDWKDPASVGGTMCFVVRFFQRNGQPYPICD 275

  Fly   202 AADSYDRICHAIGVVFSSVDRLGKS-------------------------FIRSAEPAASSSLQE 241
            ....:..:......|. ::..||.|                         .|.::..|.|..|:.
  Fly   276 TDHFFVEVTEGTRKVV-TISELGSSTDPNNANIAKVKFTVRTAGQYKISVLIGASHIAGSPFLRS 339

  Fly   242 LLANSPGALNKEQLRTLEGEHDKDEDSTQQVDEQSESAANATATAESVESEAEPEEEDDDVC--- 303
            .|   |||::..:.|.:                :..|.....|.|.:: ...||.:|..:.|   
  Fly   340 FL---PGAIDARRSRFI----------------RPASTVICCAGAPTL-MHIEPRDEFGNSCLFD 384

  Fly   304 SSQSSDTLVDLPGLRRVQRLLFGCQIRAITEKLTSSVIQLSDWVIYMRTDWERVIHCLVICFDLA 368
            .:||.:.|.             |.|:         ::..|....:      |::.|.:|..:| .
  Fly   385 QNQSDEALQ-------------GYQV---------AIYDLHGVPV------EKLQHAIVFAYD-K 420

  Fly   369 TNTNNSVVDM-----------DYLDRVLPK----LCQAASAMPVPAQARLARIWAAHCSDQLHSL 418
            .|:..||..:           .|.|:.||.    :...:|:........:|        .:.|::
  Fly   421 VNSRVSVTALFPEPTCLRAVISYRDQQLPNGDFDIIVLSSSDTTLVHKNIA--------SRKHNI 477

  Fly   419 IAACQQQITLQV----------LLDEESMRENESIISVT-KVLKIVFYANILASELERPSCRVPL 472
               |.:...|.:          :|.....::|..|..|| |.:.:.|....:|:....||.:.. 
  Fly   478 ---CYEAKLLSIFGVSKNKPRKVLCYVGPKQNSLIFQVTIKEMILKFIPKRIATFRLCPSTKFH- 538

  Fly   473 EDRTEAATASGSAAVEDDLFVYNSLLEPHMPKFAEDQFEKELQVSAIDCRKPLIPLEEFYNEALS 537
                               |:...:.:.|.|.|..|           |..:|.|           
  Fly   539 -------------------FLPQLVSQLHGPVFIID-----------DGAQPKI----------- 562

  Fly   538 ENIQMHHDYLSYKTLAMESEIGSGHANYFSFMLYAFIL-------TPSTKVDALYYDSRMRMYSE 595
                               |:.|...|..:.....|:|       |...|.|..|::.| :.::.
  Fly   563 -------------------ELASKDRNIIAATFTHFLLKNIGGSETFKDKQDFFYHEVR-KFHAS 607

  Fly   596 RYSSLHSILNNIGQVGQEDNPRPDLKLTVRRDQLINDALIGLEMVAMSNPKDLKKQLVVEFVGEQ 660
            .|                   ...:.|.|:|::::..::..::..::|   |......|.|.|||
  Fly   608 YY-------------------HEKMALKVQREKILESSMKAVKGFSVS---DWCGNFEVTFQGEQ 650

  Fly   661 GIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETNNMWFNATPFENG----AQFTLIGIIIGLAIY 721
            |||.||:.:|:|:|:...:|:...|:|....:.:....:..|....    ..|...|.::|..::
  Fly   651 GIDWGGLRREWFELVCSALFDARGGLFCTFHDKHQALVHPNPTRPAHLKLKHFEFAGKMVGKCLF 715

  Fly   722 NNV-------TLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKS-LKSML--DYQGQDMEEVF-- 774
            .:.       .:...|......:|||....:.......|.||.| :|.:|  |....|..|::  
  Fly   716 ESALGGTYRQLVRARFSRSFLAQLIGLRVHYKYFEQDDPDLYLSKIKYILDTDLDATDTLELYFV 780

  Fly   775 EQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVT 839
            |:.:..|...:...:   ||:|||....|....|..:::..:...|..|::.:.::|.||...:.
  Fly   781 EEMYDSSSGQLSKTI---ELIPNGAKTRVTNATKNQYLDALAQQRLCNNVKDEVDSFLKGLNSII 842

  Fly   840 DESPLKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLL 904
            .::.|. :|...|:|:|:||:.|:...:.:...:..|...|..:.:..||:.|......:..:||
  Fly   843 PDNLLS-IFDENELELLMCGTGEYSISDFKAHHIANGNSAEFRRVLAWFWAGVSNFSQTEMARLL 906

  Fly   905 EFTTGSARVPVGGLKCL--RLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINY- 966
            :||||.:::|.||.:.|  :..||. .|....|||:|||||.|.||:|.|.|:.|:.|:.||:. 
  Fly   907 QFTTGCSQLPPGGFQELNPQFQITA-APTFGNLPTAHTCFNQLCLPDYESYEQFEKSLLLAISEG 970

  Fly   967 SKGFGML 973
            |:||||:
  Fly   971 SEGFGMV 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 10/66 (15%)
HECTc 620..971 CDD:238033 98/369 (27%)
HECTc 647..970 CDD:214523 93/341 (27%)
CG4238NP_001259896.1 IG_FLMN 238..336 CDD:214720 11/98 (11%)
Filamin 238..336 CDD:279024 11/98 (11%)
HECTc 615..975 CDD:238033 98/367 (27%)
HECTc 642..974 CDD:214523 92/336 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446945
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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