DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and CG42797

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster


Alignment Length:1276 Identity:264/1276 - (20%)
Similarity:433/1276 - (33%) Gaps:419/1276 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EDDQHLPGVSSASGSAAGAVGG----------------RATPEMKRSAVRS-------------- 42
            |:|:....|.|..|:||.....                :.:|...|...||              
  Fly   258 EEDEEAAAVESLLGAAAALQASAHVQRRQQQQHHQHLRQPSPPQHRPLERSWPPRAVGRDLKLQG 322

  Fly    43 ---------LIKRYFHQLQSGCGNAN---------------------CSNANCASSGKVA----- 72
                     ..:|...::..|.|::|                     .|..|..|:.||.     
  Fly   323 DVFQFDILDTDERLAEEMAQGSGSSNNSPLATPPVRFKPLLKKKIGPDSYINTISTQKVPVHQSY 387

  Fly    73 --PMTPNEVAA-------RALQL--FSQDAQLCEAFTS-EANSPQDVD----MLSPNDSSSSSSG 121
              |..|:..|.       .:||.  ..|...|..|.:: :|:|.::..    :|||....|..||
  Fly   388 EFPTFPSSSAVGSSSSSPNSLQFPYLRQHRPLTRALSNGKASSSEEQASPRLLLSPKRPRSPPSG 452

  Fly   122 SSTSTITSASTTTTTSRQSQSTPAAV------VVPVSSPYLTQSVPQLDI-------AGAEHSSG 173
            .||.:.:....:.:..:.|.:....|      .||..:|......||..:       |||..:.|
  Fly   453 CSTRSASPLDISLSPEQHSPTRGRGVGGALQDAVPPGTPTFHGQRPQQRLLKRVGGGAGAGATGG 517

  Fly   174 -DSEP--CTPTLAPVH---------SLDANSLIALYEQCRAADSYDRICHAIGVVFSSVDRLGKS 226
             ...|  |.||  |.|         ::.|||.:|                            ...
  Fly   518 ATGSPLVCPPT--PTHHARRHARLQAVTANSSLA----------------------------SGG 552

  Fly   227 FIRSAEPAASSSLQELLANSPGALNKEQLRTLEGEHDKDE----DSTQ--QVDEQSESAANATAT 285
            .|.|..||.||.|..:.....|   :||     |:...||    .||:  .:.|:|.:||.|.|.
  Fly   553 AIPSDPPAVSSQLDYIYLQDGG---QEQ-----GQEQSDEVVHISSTRLPSIPERSAAAAAAAAA 609

  Fly   286 AESVESEAEP-----------------------EEEDDD-----VCSSQSSDTLVDLPGL----- 317
            |.:..:..||                       |...|.     .....:..|....||.     
  Fly   610 AAAGAALMEPGTGTVSGSSGAGAAGEPPLPPAWEARMDSHGRIFYIDHTTRTTSWQRPGAAPSGG 674

  Fly   318 -------------RRVQRLLFGCQIRAITEKLTSSVIQLSDWVIYMRTDWERVIHCLVICFDLAT 369
                         ||.|.:.     |.||.:  |...||                     ::|.|
  Fly   675 PAGREQHHRQQLDRRYQSIR-----RTITNE--SRAAQL---------------------YNLPT 711

  Fly   370 NTNNSVVDMDYLDRVLPKLCQAASAMPVPAQARLARIWAAHCSDQLHSLI------------AAC 422
            :.|::.             ...|.|.|.||.|....|... |....:||:            .|.
  Fly   712 SANSNA-------------NSTAPAAPPPATAIHPAILML-CRPDFYSLLHTNEAALAIYNRNAA 762

  Fly   423 QQQITLQVLLDE---ESMRENESIISVTKVLKIVFYANILASELERPSCRVPLEDRTEAATASGS 484
            .:.:.:::..|.   :..:.|:.::::...     :|.:   ..|.|||.....|:      ||.
  Fly   763 LKHMVMRIRRDPPCFQRYQYNKDLVALVNT-----FAQM---SRELPSCWETKLDQ------SGK 813

  Fly   485 AAVEDDLFVYNSLLEPHMP-------KFAEDQFEKELQV-------------------------S 517
            ....|......|.::|.:|       :..:...:::..|                         |
  Fly   814 QFFIDHQHRRTSFMDPRLPVECPRVVRHRQQHSQQQSSVGYYYPDLVDGNCLSATSGHINASPAS 878

  Fly   518 AIDCRKPLIPLEEFYNEALSENIQMH-H--------------DYLSYKTLAMESEIGSGHANY-- 565
            ::....||.|.....:.:.|.:...| |              |..:|....|.| .|:..|.|  
  Fly   879 SVSGVPPLPPPRPSSSSSSSRSSHGHGHNCNTTSAISCALNADRSAYGAAGMAS-AGATAAGYED 942

  Fly   566 ----FSFMLYAFILTPS-------------------TKVDAL----------------------- 584
                ::..:.||:..|:                   .|::.|                       
  Fly   943 VPIAYNEKVIAFLRQPNILEILRERQGQHTMSRQLREKINILRVEGVPALERLGHDLQLTILLSL 1007

  Fly   585 --------------------YYDSRMRMYS------ERYSSLHSILNNIGQVGQEDNPRPDLKLT 623
                                ..:|||...:      :..:.|.|....:...|....|. .|||.
  Fly  1008 FEQEIMGFVPIEERSPQGSPVLNSRMPQRAPPPFRRDFEAKLRSFYRKLESKGYGQGPH-KLKLH 1071

  Fly   624 VRRDQLINDALIGLEMVAMSNPKDLKK-QLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMF 687
            :||..|:.||   ...:..:|.|||:: :|.|.:..|:|:|.||.|:|||.|:..|:|||.:|:|
  Fly  1072 IRRSHLLEDA---FRRIMSANKKDLQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLF 1133

  Fly   688 IQQEETNNMWFNATP---FENGAQ--FTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFAD 747
             :....:......:|   |.:...  |...|.::|||:.:...|...|....|:.|:......:|
  Fly  1134 -EYSANDTYTVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVALSD 1197

  Fly   748 LSDWSPALYKSLKSMLDYQ---GQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKE 809
            |.......::||:.:.|..   |.|:...|..|     .::.|.||..||.|.|:::::.:.||:
  Fly  1198 LESLDNEFHQSLQWIRDNDIGTGVDLGLTFCVT-----EELLGSVVDRELKPGGKNIIINEKNKK 1257

  Fly   810 LFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVY 874
            .::.....:.|...:::|..:..:||..|.| |.|..:|...|:|:::.|:.|.|..:...:|.|
  Fly  1258 EYLERMIKWRLERGVQEQTESLVRGFYEVID-SRLVSVFDARELELVIAGTAEIDTNDWRLNTEY 1321

  Fly   875 EGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCL-------RLLITRHG-PD 931
            ..||.:..|.|..||.::....:|.:.:||:|.||::.:|..|...|       |..|.:.| |:
  Fly  1322 RSGYHDNHQVIVWFWQVIERFSNEQRLRLLQFVTGTSSIPYEGFSALRGSTGPRRFCIEKWGKPN 1386

  Fly   932 SDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINYSKGFGM 972
            :  ||.:|||||.|.||.|.:.|.|.|:|:.|:..:..||:
  Fly  1387 A--LPRAHTCFNRLDLPPYPTPELLYEKLLLAVEETNTFGI 1425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 17/113 (15%)
HECTc 620..971 CDD:238033 110/367 (30%)
HECTc 647..970 CDD:214523 100/339 (29%)
CG42797NP_572574.2 WW 638..667 CDD:278809 3/28 (11%)
HECTc 1068..1424 CDD:238033 110/367 (30%)
HECTc 1092..1423 CDD:214523 100/339 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446969
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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