Sequence 1: | NP_648452.1 | Gene: | Ube3a / 39266 | FlyBaseID: | FBgn0061469 | Length: | 973 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001012074.1 | Gene: | Herc4 / 309758 | RGDID: | 1310971 | Length: | 1057 | Species: | Rattus norvegicus |
Alignment Length: | 662 | Identity: | 204/662 - (30%) |
---|---|---|---|
Similarity: | 316/662 - (47%) | Gaps: | 112/662 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 369 TNTNNSVVDMDYLDRVLPKLCQAASAMPVPAQARLARIWAAHCSDQLHSLIAACQQQITLQVLLD 433
Fly 434 EESMRENESIISVTKVLKIVFYANILASELERPSCRVPL----EDRTEAATASGSAAVEDD---- 490
Fly 491 --LFVYNSLLEPHMPKFAE-DQFEKELQVSAIDCRK----------------------------- 523
Fly 524 ----PLIPLEEFYNEALSENIQMHHDYLSY-KTLAMESEIGSGHANY----FSFMLYAFILTPST 579
Fly 580 KVDALYYDSRMRM-------YSERYSSLH-SILNNIGQVGQEDNPRPDLKLTVRRDQLINDALIG 636
Fly 637 LEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETNNMWFNAT 701
Fly 702 PFENGAQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKSLKSMLDYQ 766
Fly 767 GQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAF 831
Fly 832 RKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMP 896
Fly 897 SEDKHKLLEFTTGSARVPVGGLKCLRLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLM 961
Fly 962 KAINYSKGFGML 973 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ube3a | NP_648452.1 | AZUL | 40..94 | CDD:293166 | |
HECTc | 620..971 | CDD:238033 | 141/350 (40%) | ||
HECTc | 647..970 | CDD:214523 | 132/322 (41%) | ||
Herc4 | NP_001012074.1 | RCC1 1 | 1..51 | ||
RCC1 | 3..49 | CDD:278826 | |||
RCC1 2 | 52..101 | ||||
RCC1 | 52..99 | CDD:278826 | |||
RCC1 3 | 102..154 | ||||
RCC1 | 102..152 | CDD:278826 | |||
RCC1 4 | 156..207 | ||||
RCC1 | 157..205 | CDD:278826 | |||
RCC1 5 | 208..259 | ||||
RCC1 | 208..257 | CDD:278826 | |||
RCC1 | 260..308 | CDD:278826 | |||
RCC1 6 | 261..311 | ||||
RCC1 7 | 313..366 | ||||
RCC1 | 313..>343 | CDD:278826 | |||
HECTc | 709..1055 | CDD:238033 | 141/350 (40%) | ||
HECTc | 735..1054 | CDD:214523 | 131/320 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D276447at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |