DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and Hectd2

DIOPT Version :10

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_038936565.1 Gene:Hectd2 / 309514 RGDID:1305536 Length:813 Species:Rattus norvegicus


Alignment Length:817 Identity:243/817 - (29%)
Similarity:375/817 - (45%) Gaps:165/817 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 PGALNKEQLRTLEGE-HDKDEDSTQQVDEQSESAANATATAESVESEAEPEEEDDDVCSSQSSDT 310
            ||:    ...|.||: ...|..|..|:...|...::.|...|:.|              ::||.|
  Rat    70 PGS----SATTGEGKARGLDRGSKGQISTFSSFVSSVTQKKEAAE--------------NRSSPT 116

  Fly   311 LVDLPGLRRVQRLLFGCQIRAITEKLTSSVIQLSDWV--------------------------IY 349
            .:.||.:|.|:.|...|  ..:.:|...|:..||..|                          ..
  Rat   117 HLALPNIRNVRDLPPIC--LDVRQKQRMSMDSLSSEVKVPPLPEPILPSQPKTVKDFEEDLEKAE 179

  Fly   350 MRTDWERVIHCLVICFDLATNTN-----------NSVVDMDYLDRVLPKLCQAASAMPVPAQA-- 401
            ...:|:.|....:..||..|..|           |::.|......::..:..|....|...|.  
  Rat   180 ATGNWKTVHAFYITAFDSFTELNAAFKKDATASFNTIEDSGINANLVNAVFDALLNTPQDIQKSV 244

  Fly   402 ------RLARIW-AAHCSDQLHS---LIAACQQQITLQVLLDEESMRENESIIS----------- 445
                  .|.:.| .....|.|.:   |:...|..||...::....:|:..:::.           
  Rat   245 LKGIINSLLQEWKGPRTKDDLRAYFILLQNPQFNITSTYVIYAHLLRQIATLVEADHHFLVHWLK 309

  Fly   446 ----------VTKVLKIVFYANILASELERPSCRVPLEDRTEAATASGSAA-VEDDLFVYNSLLE 499
                      |.::|:.|......|...|.|    ||   |:......||| |...|...|:|:.
  Rat   310 KLSQKKFKQLVERLLQFVSLRLFPAKPEEFP----PL---TKCTWWIPSAAKVLALLNTANNLVH 367

  Fly   500 PHMPKFAEDQFEKELQVSAIDCRKPLIPLEEFYNEALSENIQMHHDYLSYKTLAMESEIGSGHAN 564
            |                       ||:|..:|||..| ::|.:..:|.::::      .|:.|:.
  Rat   368 P-----------------------PLVPYTDFYNSTL-DHIDLMEEYHTWQS------FGNSHSR 402

  Fly   565 YFSFMLYAFILTPSTKVDALYYDSRMRMYSERYSSLHSILNNIGQVGQEDNPRPD-----LKLTV 624
             |||..|.|:::.:.|...:..||..:|.|....||      :.:|.:..  |||     |.:.|
  Rat   403 -FSFCQYPFVISITAKKIIIQRDSEQQMISIARQSL------VDKVSRRQ--RPDMNMLFLNMKV 458

  Fly   625 RRDQLINDALIGLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQ 689
            ||..|::|:|..|    .....||||:|.|.||||.|:|.||::||:|.|::.:||:|.:|||..
  Rat   459 RRTHLVSDSLDEL----TRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTY 519

  Fly   690 QEETNNMWFNATPFENGAQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKL-------------IGY 741
            .::::..||::...:|.::|.|:||::|||:||::||.:.||...|:||             :|.
  Rat   520 HKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGI 584

  Fly   742 CG-TFADLSDWSPALYKSLKSMLDYQGQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQ 805
            |. |..||....|.|...||.:|.|:| ::||.|..||:: :.:.||.:..:.|.|.|..:.|..
  Rat   585 CSVTIDDLCQIMPELAHGLKELLSYEG-NVEEDFYSTFQV-FQEEFGVIKSYNLKPGGDKIPVTN 647

  Fly   806 HNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELEN 870
            .|:..:|.||:|||||.:|.:||.||..||..|...:.|.|| ||||:|:|||||.|.|...|:.
  Rat   648 QNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLL-RPEEVEILVCGSPELDMHALQR 711

  Fly   871 STVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCLRLLITRHGPDSDRL 935
            ||.|: ||.:....|:.||.:|...|.|.:.|||.|||||.||||||:..|...|:::...::.|
  Rat   712 STQYD-GYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNWL 775

  Fly   936 PTSHTCFNVLLLPEYSSREKLEERLMKAINYSKGFGM 972
            |.:|||||.|.||.|.|::.|:::|:..|:.|:|||:
  Rat   776 PVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGL 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:465173
HECTc 620..971 CDD:238033 151/364 (41%)
Hectd2XP_038936565.1 HECTc 454..811 CDD:238033 151/364 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.