DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and Plekha7

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_017177675.1 Gene:Plekha7 / 233765 MGIID:2445094 Length:1359 Species:Mus musculus


Alignment Length:596 Identity:119/596 - (19%)
Similarity:190/596 - (31%) Gaps:189/596 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LPGVSSASGSAAGAVGGRATPEMKRSAVRSLIKRYFHQLQSGCGNANCSNANCASSGKVAPMTPN 77
            |||         |..|.:|.|:   .|.::.:..|      |.|..|.:|    ...:.||...|
Mouse   376 LPG---------GPRGQQAQPQ---RAEKNGVPPY------GLGEQNGTN----GYQRTAPPRAN 418

  Fly    78 EVAARALQLFSQDAQLCEAFTSEANSPQDVDMLSPNDSSSSSSGSSTSTITSASTTTTTSRQSQS 142
                                 .|.:|.:...:......:.:..|..    .|.....|..||..|
Mouse   419 ---------------------PEKHSQRKTGLAQAEHWTKAQKGDG----RSLPLDQTLPRQGPS 458

  Fly   143 TPAAVVVPVSSPYLTQSVPQLDIAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQCRAA---- 203
            .      |:|.|...||:|:    ...|.||.|.|      |..:|.::   ..|.|.||:    
Mouse   459 Q------PLSFPENYQSLPK----STRHLSGSSSP------PPRNLPSD---YKYAQDRASHLKM 504

  Fly   204 DSYDRICHAIGVVFSSVDRLGKSFIRSAEPAASSSLQELLANSPGALNKEQLRTL---------- 258
            .|.:|..|..|.|:...:...:...|...|.|     .:.|.||....:.:.|:|          
Mouse   505 SSEERRAHRDGTVWQLYEWQQRQQFRHGSPTA-----PIGAGSPEFTEQGRSRSLLEVPRSISVP 564

  Fly   259 -----------------EGEHDKDEDSTQQVDEQSESA------------ANATATAESVESEAE 294
                             ...|...|..|.:..||..|.            .:|...:..|:..:.
Mouse   565 PSPSDIPPPGPPRPFPPRRPHTPAERVTVKPPEQRRSVDISLGGSPRKARGHAAKNSSHVDRRSM 629

  Fly   295 PE-------EEDDDVCSSQSSDTLVDLPGLRRVQRLLFGCQIRAITE----KLTSSVIQLSDWVI 348
            |.       .....:......:..:.|..|:|.|..|...:..|:.:    .||....|..|..:
Mouse   630 PSMGYMTHTVSAPSLHGKSLEELSLLLTRLQRHQSKLASVRNFAVGQLLHHYLTFPACQADDTYL 694

  Fly   349 YMRTDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPK---------------LCQAASAMPVP 398
            .::.|.|.:        ||....|..::::.|  :||.|               |.:..|..|: 
Mouse   695 QLKKDLEYL--------DLKIKNNEPLINVLY--KVLKKSARGCRPGRSMTGRDLLKDRSLKPM- 748

  Fly   399 AQARLARIWAAHCSDQLHSLIAACQQQITLQVLLDE-ESMREN-ESIISVTKVL----------- 450
               ::|.      ||....|...|:|...||.|.|: .:::|| :.:.||.:||           
Mouse   749 ---KIAE------SDIDVKLSIFCEQDRILQDLEDKIRALKENKDQLESVLEVLHRQTEQYRDQP 804

  Fly   451 ----KIVFYANILASEL---ERPSCRVPLEDRTEAATA-SGSAAVEDDL-FVYNSLLEPHMPKF- 505
                ||.....:|..:|   ....||    :.||...| :....:|.|: .:..:|.|.|...| 
Mouse   805 QHLEKITCQQRLLQEDLVHIRAELCR----ESTEMENAWNEYLKLEKDVEQLKQTLQEQHRRAFF 865

  Fly   506 --AEDQFEKEL 514
              .:.|.:|:|
Mouse   866 FQEKSQIQKDL 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 8/53 (15%)
HECTc 620..971 CDD:238033
HECTc 647..970 CDD:214523
Plekha7XP_017177675.1 WW 10..39 CDD:366073
WW 55..84 CDD:366073
PH_PEPP1_2_3 158..280 CDD:270068
Smc <692..>894 CDD:224117 46/209 (22%)
PHA03247 <903..1009 CDD:223021
PRK10263 <912..>1118 CDD:236669
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.