DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and yap-1

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001369894.1 Gene:yap-1 / 181267 WormBaseID:WBGene00008748 Length:442 Species:Caenorhabditis elegans


Alignment Length:483 Identity:89/483 - (18%)
Similarity:151/483 - (31%) Gaps:166/483 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 CEAFTSEANSPQDVDML---------SPNDSSSSSSGSSTSTITSASTTTTTSRQSQSTPAAVVV 149
            |.....|.|..|..:.|         :|..|:.|..||    :..:|.|..       :||..:|
 Worm    39 CSEKKYEKNQNQKKNPLPSSYYHQKRNPGSSAHSPYGS----VDESSRTAV-------SPAMDMV 92

  Fly   150 PVSSPYLTQ--SVPQLDIAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQCRAADSYDRICHA 212
            ...:|..|:  |.|.|..:.....|..:.| .|:...||...:.|:.||               .
 Worm    93 SNQAPIHTRQVSAPNLHTSVNNGQSSATVP-HPSHHNVHHQHSKSVSAL---------------P 141

  Fly   213 IGVVFSSVDRLGKSFIRSAEPAASSSLQELLANSPGALNKEQLRTLEGEHDKDEDSTQQVDEQS- 276
            :.:.:|.|    .|.::|....|:.|...|                 .|..:.:...||..|:| 
 Worm   142 MTIGYSPV----PSHVKSVSHEANYSYAGL-----------------SEIPQQQGMMQQNREKSL 185

  Fly   277 --ESAANATATAESVESEAEPE-----EEDDDV---CSSQSSDTLVDLPGLRRVQRLLFGCQIRA 331
              :.......|.:.||....|:     .:.|.|   ....|..|..|.|.|::.::..||     
 Worm   186 SLDPMRRPFMTPQDVEQLPMPQGWEMCYDSDGVRYFKDHNSKTTTWDDPRLKQQEQTGFG----- 245

  Fly   332 ITEKLTSSVIQLSDWVIYMRTDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQAASAMP 396
                       |.:                    ::..|..|:..|..:..|.||.:.|....:|
 Worm   246 -----------LGE--------------------NIGQNRYNNCYDNGHSSRSLPSIHQHQQMIP 279

  Fly   397 VPAQARLARIWAAHCSDQLHSLIAACQQQIT-LQVLLDEESMRENESIISVTKVLKIVFYANILA 460
                        .|...|..|     |||:. :|.|.:|..|.:.::             |.::.
 Worm   280 ------------NHPQPQYSS-----QQQMDYIQQLQNERMMIQEKN-------------AQLIN 314

  Fly   461 SEL-ERPSCRVPLEDRTEAATASGSAAVEDDLFVYNSLLEPHMPKFAEDQFEKELQVSAIDCRKP 524
            |.| :.|      :...:|.:...|           :::..|.|.|...|     |..|.:.::.
 Worm   315 SGLVDSP------QPPYQAISPMSS-----------TMMHSHDPNFMYQQ-----QQQAQNSQQQ 357

  Fly   525 LIP------LEEFYNEALSENIQMHHDY 546
            ..|      ..::.|..::::..|..||
 Worm   358 QTPHTLHQIPNQYQNSQMNDDSAMEVDY 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 89/483 (18%)
HECTc 620..971 CDD:238033
HECTc 647..970 CDD:214523
yap-1NP_001369894.1 WW 206..236 CDD:238122 7/29 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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