DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and hecw-1

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001317872.1 Gene:hecw-1 / 175438 WormBaseID:WBGene00009738 Length:1247 Species:Caenorhabditis elegans


Alignment Length:1009 Identity:210/1009 - (20%)
Similarity:362/1009 - (35%) Gaps:316/1009 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NCSNANCASSGKVAPMTPNEVAARALQLFSQDAQLCEA---FTSEANSPQDVDM-LSPND----- 114
            |..||:....|.:..||...:|.      |::.::|::   ...|...|::::: |:.|.     
 Worm   453 NLLNASEVYFGLIDGMTGRLLAK------SENVEICKSASLVVHEVKKPENINVYLNTNHGRIEI 511

  Fly   115 ----SSSSSSGSSTSTITSASTTTTTSRQSQSTPAAVVVPVSSPYLTQSVPQLDIAGAEHSSGDS 175
                |.|..:||..|:..                           ....|..|.|:..|:|.   
 Worm   512 PKKRSFSRKNGSFRSSFE---------------------------FDFDVEDLHISLVENSE--- 546

  Fly   176 EPCTPTLAPVHSLDANSLIALYEQCRAADSYDRICHAIGVVFSSVDRLGKSFIRSAEPAASSS-- 238
                 .|...|.:.:|.|...|.|.::...    .|.:.:|||...:..|.........||||  
 Worm   547 -----KLNFDHFIASNQLQNNYIQSKSFSH----SHVVEIVFSIEPKTSKKSAPDIMEIASSSQT 602

  Fly   239 ----------------------LQELLANSPGALNKEQLRTLEGEHDKDEDSTQQVDEQSESAAN 281
                                  .:|.....|..||...:......|       :::.::|.|..|
 Worm   603 PPESHWKTYLDAKKRKFYVNHVTKETRWTKPDTLNNNHIEPETPVH-------KRLSDRSASPRN 660

  Fly   282 ATATAE---SVESEAEPEE----------------EDDDVCSSQSSDTLVDLPGLRRVQRLL--- 324
            :..|..   :|.|...|:.                |:.|.....:..::| ...:.|:|:.|   
 Worm   661 SFITPRRTITVRSAGCPKSDLIQFFQRDEFKTALYENQDAMQIYNECSVV-RHAIHRIQKDLDPP 724

  Fly   325 -----------FGCQIRAITEKLTSSVIQLSDWVIYMRTDWERVIHCLVICFDLATNTNNSVVDM 378
                       |......||:.|.|.              ||    |:.:        ||..|.:
 Worm   725 SKFENQPLFVRFVNLFADITQPLPSG--------------WE----CITM--------NNRTVFL 763

  Fly   379 DY-----------LDRVLPKLCQAASAMPVPAQARLARIWAAHCSDQLHSLIAACQQQITLQVLL 432
            ::           :.|...|..:...::|       :|...||.....|:||:.|          
 Worm   764 NHANKETSFYDPRIRRFETKTSRRGRSVP-------SRSSTAHKGKIDHALISKC---------- 811

  Fly   433 DEESMRENESIISVTKVLKIVFYANILASELERPSCRVPLEDRTEAATASGSAAVEDDLFVYNSL 497
              |.:|:    |:.....:|.          ||.|.::.|.:|. ...|..|.|.:.|:.:..|:
 Worm   812 --EDLRK----IAQDNFPQIA----------ERISKKLMLIERF-GGLAVASLANDLDITLALSM 859

  Fly   498 LEPHMPKFAEDQFEKELQVSAIDCRKPLIPLEEFYNEALSENIQMHHDYLSYKTLAMESEIGSGH 562
            |:.:..|.|.:                            .:||:|.::.:.      :.::|.| 
 Worm   860 LDSNTEKLAGE----------------------------GDNIKMFYEDMK------KEKLGKG- 889

  Fly   563 ANYFSFMLYAFILTPSTKVDALYYDSRMRMYSERYSSLHSILNNIGQVGQEDNPRPDLKLTVRRD 627
                          ||.                                        |...|.||
 Worm   890 --------------PSR----------------------------------------LCWKVSRD 900

  Fly   628 QLINDALIGLEMVAMSNPKDLKK-QLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQE 691
            :|::||   ..::...:|..||| :|.:.|.||..:|.||:|:|||.|:..|:|:|..|.|  :.
 Worm   901 RLLDDA---FRIILNVDPFVLKKSRLHIRFEGELALDYGGLSREFFILLSRELFHPKNGYF--EY 960

  Fly   692 ETNNMWFNATPFENGAQ-------FTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLS 749
            |.|:......|  .|.:       ..|.|.::.||:.:...:.|.|..|.|:.|.....|..|..
 Worm   961 EGNDYHLQLRP--RGCETEKEKKWLILCGRVLALAVIHRCYIDVFFTNVFYKSLQKRPVTLMDFK 1023

  Fly   750 DWSPALYKSLKSMLDYQGQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNL 814
            :.....|||:..:|:....|:|..|     :..|.|.|.:.:.||||.|:..:|.:.||..|::|
 Worm  1024 ESDAEFYKSMNWLLENDVVDLEMSF-----VYSSMVNGKLAEQELVPGGESQMVTEANKAEFIDL 1083

  Fly   815 YSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYT 879
            .........:|:........|..:.:::.|..| ...:::.::.||.|.|..:...:|:|:|||:
 Worm  1084 MCQKKAIRGVEKPLEILLTSFNQILNDNLLNSL-ESSDLKRILSGSLELDLNDWRTNTIYKGGYS 1147

  Fly   880 EKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCLR-------LLITRHGPDSDRLPT 937
            :....::.||.::..|.::::..||.|.|||:.||..|...||       ..|.:.| |:...|.
 Worm  1148 DCHIVVEWFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSALRGNEEISKFCIEKWG-DATSFPR 1211

  Fly   938 SHTCFNVLLLPEYSSREKLEERLMKAI----NYS 967
            :|||||.|.||.|:::::|:.:|.:||    :||
 Worm  1212 AHTCFNRLQLPSYNTKQQLKSKLQQAIVNGMSYS 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 8/34 (24%)
HECTc 620..971 CDD:238033 109/367 (30%)
HECTc 647..970 CDD:214523 101/340 (30%)
hecw-1NP_001317872.1 FBA_2 230..285 CDD:311601
WW 603..634 CDD:197736 1/30 (3%)
WW 746..777 CDD:197736 8/56 (14%)
HECTc 918..1244 CDD:214523 99/336 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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