DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and Magi2

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_446073.2 Gene:Magi2 / 113970 RGDID:621855 Length:1277 Species:Rattus norvegicus


Alignment Length:661 Identity:126/661 - (19%)
Similarity:189/661 - (28%) Gaps:260/661 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 CQQQITLQVLLDEESMRENESIISVTKVLK---------IVFYANILASELERPSCRVPLEDRTE 477
            |:..:.:::  ::::: :|.|...|..:||         ::.:.....|..:.|.   |:.||.|
  Rat   641 CEGDLIVEI--NQQNV-QNLSHTEVVDILKDCPVGSETSLIIHRGGFFSPWKTPK---PMVDRWE 699

  Fly   478 ----AATASGSAAVEDDLFVYNSLLEPHMPKFAEDQFEKELQVSAIDCRKPLIPLEEF-YNEALS 537
                ..|:..:.||...|        |..|......|....:  |.|.||| .|.|.: .:.|:.
  Rat   700 NQGSPQTSLSAPAVPQSL--------PFPPALHRSSFPDSTE--AFDPRKP-DPYELYEKSRAIY 753

  Fly   538 ENIQ---------MHHDYLSYKTL-----AMESEIG----SGHANYFSFMLYAFILTPSTKVDAL 584
            |:.|         |......||.|     .|||..|    .|.......::.|.|...|...|..
  Rat   754 ESRQQVPPRTSFRMDSSGPDYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGR 818

  Fly   585 YYDSRMRMY---------SERY--SSLHSILNNIGQVGQEDNPRPDLKLTVRRDQLINDALIGLE 638
            .:.....:|         :.||  ..:|....| |||          .|||||..|...      
  Rat   819 LHPGDELVYVDGIPVAGKTHRYVIDLMHHAARN-GQV----------NLTVRRKVLCGG------ 866

  Fly   639 MVAMSNPKDLKKQLVVEFVGEQGIDEGGVS---------------------------KEFF---- 672
                            |...|.|...|.||                           .|.|    
  Rat   867 ----------------EPCPENGRSPGSVSTHHSSPRSDYATYANSNHAAPSSNASPPEGFASHS 915

  Fly   673 ----QLIVEEIFNPAFGMFIQQEETNNMWFNATPFENGAQFTL---IGIIIGLAIYNNVTLAVNF 730
                .:|:....|..|| |:.....|..       |:||..|:   ||.||              
  Rat   916 LQTSDVIIHRKENEGFG-FVIISSLNRP-------ESGATITVPHKIGRII-------------- 958

  Fly   731 PMVVYRKLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDMEEVFEQTFKISYSDVFGDVVQHELV 795
                               |.|||                    ::..|:...|       ..|.
  Rat   959 -------------------DGSPA--------------------DRCAKLKVGD-------RILA 977

  Fly   796 PNGQDVLVGQHNKELFVNLYSDFLLNTNI----EQQFN------AFRKGFEMVTDESPL----KL 846
            .|||.::...|..  .|.|..|..|:..:    :::.|      :..|...|....|||    ..
  Rat   978 VNGQSIINMPHAD--IVKLIKDAGLSVTLRIIPQEELNSPTSAPSSEKQSPMAQQHSPLAQQHSP 1040

  Fly   847 LFRPEEIEMLVCGSREFDFVELENSTV-------------YEGGYTEKSQYIQDFWSIVHAMPSE 898
            |.:|..              ...||.|             :|..|..:.:..||....:...|..
  Rat  1041 LAQPSP--------------ATPNSPVAQPAPPQPLQLQGHENSYRSEVKARQDVKPDIRQPPFT 1091

  Fly   899 D-KHKLLEFTTGSARVPVGG--LKCLRLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERL 960
            | :...|::     |.|.||  .:...|...:|.||:.:.|          |.:|...:..:...
  Rat  1092 DYRQPPLDY-----RQPPGGDYSQPSPLDYRQHSPDTRQYP----------LSDYRQPQDFDYFT 1141

  Fly   961 MKAINYSKGFG 971
            :.....:||||
  Rat  1142 VDMEKGAKGFG 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166
HECTc 620..971 CDD:238033 74/418 (18%)
HECTc 647..970 CDD:214523 67/390 (17%)
Magi2NP_446073.2 PDZ_signaling 22..96 CDD:238492
GuKc 118..291 CDD:214504
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..308
Interaction with DDN. /evidence=ECO:0000250 302..381
WW 304..333 CDD:395320
WW 350..381 CDD:197736
PDZ 428..509 CDD:214570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 556..575
PDZ 602..683 CDD:214570 6/44 (14%)
MAGI_u5 687..758 CDD:406953 21/84 (25%)
PDZ 775..861 CDD:214570 23/96 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 869..913 7/43 (16%)
PDZ_signaling 920..1007 CDD:238492 29/156 (19%)
PRK10263 <1007..>1135 CDD:236669 29/156 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1011..1130 28/147 (19%)
PDZ_signaling 1140..1220 CDD:238492 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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