DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plod and AT3G18210

DIOPT Version :10

Sequence 1:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_566600.1 Gene:AT3G18210 / 821348 AraportID:AT3G18210 Length:394 Species:Arabidopsis thaliana


Alignment Length:291 Identity:71/291 - (24%)
Similarity:114/291 - (39%) Gaps:67/291 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 KEFDPDMAMCESLRNAGI-FMYASNLRIFGHLVNAD--------DFNTTVT------RPDFYTLF 516
            |...|:|.:  |.|:..| ||....||   ||.:.:        |:...:|      ..:.|||.
plant    78 KYLPPNMLV--SNRDEKIKFMTDIMLR---HLPHGERSRAQRHSDYRLKITTNYQPLHKELYTLV 137

  Fly   517 SNEIDWTEKYIHPNYSLQLNES------NKIQQPCPDVYWFQIVSDAFCDDLVAIMEAHNGWSDG 575
            .     |..:: |.:...:||:      |.|.:|.|.|:.|.::..:||:.::|.::....|...
plant   138 P-----TVCFV-PAFLKAINENTEESFRNIISEPSPGVFVFDMLQPSFCEMMLAEIDNFERWVGE 196

  Fly   576 S-------NNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQMFVRPLQERAFTGYFHNPPRALM 633
            :       |..|:    |.||      :...||:.:..|.::.|:||:.:..|:........:..
plant   197 TKFRIMRPNTMNK----YGAV------LDDFGLDTMLDKLMEGFIRPISKVFFSDVGGATLDSHH 251

  Fly   634 NFMVRYRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCRFIRYNCSV---TDTK-------- 687
            .|:|.|..|....|..|.|.|..|:|:.:   |..:.||...|....|..   |.||        
plant   252 GFVVEYGKDRDVDLGFHVDDSEVTLNVCL---GNQFVGGELFFRGTRCEKHVNTATKADETYDYC 313

  Fly   688 --KGWMLMHPGRLTHYHEGLLVTNGTRYIMI 716
              .|..::|.||  |.|.....|.|.|..|:
plant   314 HIPGQAVLHRGR--HRHGARATTCGHRVNML 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlodNP_648451.1 GT_LH 27..257 CDD:459235
Glyco_tranf_GTA_type 303..>395 CDD:472172
P4Hc 555..719 CDD:214780 44/182 (24%)
AT3G18210NP_566600.1 P4Hc 176..346 CDD:214780 44/182 (24%)
Blue background indicates that the domain is not in the aligned region.

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