DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plod and PLOD2

DIOPT Version :9

Sequence 1:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_891988.1 Gene:PLOD2 / 5352 HGNCID:9082 Length:758 Species:Homo sapiens


Alignment Length:761 Identity:323/761 - (42%)
Similarity:480/761 - (63%) Gaps:61/761 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLLLAVTSQGDAESNWN---------------DKIKVFTVATEPTDGYTRYIRSARVYDIEVTTL 59
            |||||:...     .||               ||:.|.||||:.:||:.|:::||:.::..|..|
Human    10 LLLLALVLH-----PWNPCLGADSEKPSSIPTDKLLVITVATKESDGFHRFMQSAKYFNYTVKVL 69

  Fly    60 GLGEEWKGGD-MQKPGGGFKLNLLREAIAPYKNEPETIILFTDSYDVIITTTLDEIFEKFKESGA 123
            |.||||:||| :...|||.|:.|::|.:..|.::.:.:::||:.:|||.....:|:.:||:::..
Human    70 GQGEEWRGGDGINSIGGGQKVRLMKEVMEHYADQDDLVVMFTECFDVIFAGGPEEVLKKFQKANH 134

  Fly   124 KILFSAEKYCWPDKSLANDYPEVE-GKASRFLNSGAFIGYAPQVFALLVD-PIEDTADDQLYFTK 186
            |::|:|:...||||.||:.||.|. ||  |:||||.||||||.|..::.. .::|..||||::||
Human   135 KVVFAADGILWPDKRLADKYPVVHIGK--RYLNSGGFIGYAPYVNRIVQQWNLQDNDDDQLFYTK 197

  Fly   187 IFLDETKRAKLGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNVDFMTTPSIIHGNGLSKV 251
            :::|..||..:.:.||.:.::||.|:||.::|.||  .|:.:...:|..:.|.|..|:|||.:|:
Human   198 VYIDPLKREAINITLDHKCKIFQTLNGAVDEVVLK--FENGKARAKNTFYETLPVAINGNGPTKI 260

  Fly   252 DLNAYGNYLARTF---NGVCLLCQENLLDLEETNL-PVISLALMVTQPVPFFDQFLEGIESLNYP 312
            .||.:|||:..::   || |.||:.:.:||...:: |.:|:.:.:.||.||..:||:.:.:|:||
Human   261 LLNYFGNYVPNSWTQDNG-CTLCEFDTVDLSAVDVHPNVSIGVFIEQPTPFLPRFLDILLTLDYP 324

  Fly   313 KEKLHLLIYSNVAFHDDDIKSFVNKHAKEYATAKFALSTDELDERQGRQLALDKARLHQS-DYIF 376
            ||.|.|.|::...:|:.|||.|.:|...|..|.|.....:.|.:.:.|.:.:|..|..:. ||.|
Human   325 KEALKLFIHNKEVYHEKDIKVFFDKAKHEIKTIKIVGPEENLSQAEARNMGMDFCRQDEKCDYYF 389

  Fly   377 FVDADAHIDDGEVLRELLRLNKQFVAPIFSKHKELWSNFWGALSEGGYYARSHDYVDIVKRELIG 441
            .||||..:.:...|:.|:..|::.:||:.::|.:||||||||||..||||||.||||||:...:|
Human   390 SVDADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGNRVG 454

  Fly   442 MFNVPHVTSIYLVK-KTAFDAIS----FKHKEFDPDMAMCESLRN-------------------- 481
            ::|||::.::||:| ||....::    |...:.|||||:|.:.|.                    
Human   455 VWNVPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREMTLQREKDSPTPETFQMLSP 519

  Fly   482 -AGIFMYASNLRIFGHLVNADDFNTTVTRPDFYTLFSNEIDWTEKYIHPNYSLQLNESNKIQQPC 545
             .|:|||.||...||.|::..::||:....|.:.:|.|.:||.||||:.:||....| |.::|||
Human   520 PKGVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENPVDWKEKYINRDYSKIFTE-NIVEQPC 583

  Fly   546 PDVYWFQIVSDAFCDDLVAIMEAHNGWSDGSNNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQ 610
            |||:||.|.|:..||:||..||.:..||.|.::|:|:.||||.|||.|||||||.||.::|.|::
Human   584 PDVFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRISGGYENVPTDDIHMKQVDLENVWLHFIR 648

  Fly   611 MFVRPLQERAFTGYFHNPPRALMNFMVRYRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCR 675
            .|:.|:..:.|.||: ....||:||:|:|.|:.|.|||||||:||:|||||:|..|.|:|||||:
Human   649 EFIAPVTLKVFAGYY-TKGFALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQGGGCK 712

  Fly   676 FIRYNCSVTDTKKGWMLMHPGRLTHYHEGLLVTNGTRYIMISFIDP 721
            |:|||||:...:|||..||||||||.||||.|.||||||.:|||||
Human   713 FLRYNCSIESPRKGWSFMHPGRLTHLHEGLPVKNGTRYIAVSFIDP 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlodNP_648451.1 Glyco_tranf_GTA_type 303..>395 CDD:325014 31/92 (34%)
P4Hc 555..719 CDD:214780 94/163 (58%)
PLOD2NP_891988.1 P4Hc 593..756 CDD:214780 94/163 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159595
Domainoid 1 1.000 508 1.000 Domainoid score I327
eggNOG 1 0.900 - - E1_KOG1971
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 658 1.000 Inparanoid score I776
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52469
OrthoDB 1 1.010 - - D107532at33208
OrthoFinder 1 1.000 - - FOG0001885
OrthoInspector 1 1.000 - - otm41162
orthoMCL 1 0.900 - - OOG6_102482
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1243
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.670

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