DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plod and Plod2

DIOPT Version :10

Sequence 1:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001136388.1 Gene:Plod2 / 26432 MGIID:1347007 Length:758 Species:Mus musculus


Alignment Length:752 Identity:325/752 - (43%)
Similarity:481/752 - (63%) Gaps:45/752 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLLLAVTSQGDAESNWN----DKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGG 68
            :|.||......|.||....    ||:.|.||||:..||:.|::.||:.::..|..||.|:||:||
Mouse    14 MLALLSWAAGLGVAEETPGRIPADKLLVITVATKENDGFHRFMNSAKYFNYTVKVLGQGQEWRGG 78

  Fly    69 D-MQKPGGGFKLNLLREAIAPYKNEPETIILFTDSYDVIITTTLDEIFEKFKESGAKILFSAEKY 132
            | |...|||.|:.||:||:..|.::.:.:||||:.:||:.....:|:.:||:::..||:|:|:..
Mouse    79 DGMNSIGGGQKVRLLKEAMEHYASQEDLVILFTECFDVVFAGGPEEVLKKFQKTNHKIVFAADGL 143

  Fly   133 CWPDKSLANDYPEVE-GKASRFLNSGAFIGYAPQVFALLVD-PIEDTADDQLYFTKIFLDETKRA 195
            .||||.||:.||.|. ||  |:||||.||||||.:..|:.. .::|..||||::||:::|..||.
Mouse   144 LWPDKRLADKYPVVHIGK--RYLNSGGFIGYAPYISRLVQQWNLQDNDDDQLFYTKVYIDPLKRE 206

  Fly   196 KLGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNVDFMTTPSIIHGNGLSKVDLNAYGNYL 260
            ...:.||.:.::||.|:||.::|.||  .|:.:..::|..:.|.|..|:|||.:|:.||.:|||:
Mouse   207 AFNITLDHKCKIFQALNGATDEVVLK--FENGKSRVKNTFYETLPVAINGNGPTKILLNYFGNYV 269

  Fly   261 ARTF---NGVCLLCQENLLDLEETNL-PVISLALMVTQPVPFFDQFLEGIESLNYPKEKLHLLIY 321
            ..::   || |.||..:.:||...:: |.::|.:.:.||.||..:||..:.:|:||||.|.|.|:
Mouse   270 PNSWTQENG-CALCDVDTIDLSTVDVPPKVTLGVFIEQPTPFLPRFLNLLLTLDYPKEALQLFIH 333

  Fly   322 SNVAFHDDDIKSFVNKHAKEYATAKFALSTDELDERQGRQLALDKARLHQS-DYIFFVDADAHID 385
            :...:|:.|||.||:|...:.::.|.....:.|.:.:.|.:.:|..|..:. ||.|.||||..:.
Mouse   334 NKEVYHEKDIKVFVDKAKHDISSIKIVGPEENLSQAEARNMGMDFCRQDEKCDYYFSVDADVVLT 398

  Fly   386 DGEVLRELLRLNKQFVAPIFSKHKELWSNFWGALSEGGYYARSHDYVDIVKRELIGMFNVPHVTS 450
            :...|:.|:..|::.:||:.::|.:||||||||||..||||||.||||||:...:|::|||::.:
Mouse   399 NPRTLKFLIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGNRVGIWNVPYMAN 463

  Fly   451 IYLVK-KTAFDAIS----FKHKEFDPDMAMCESLRN---------------------AGIFMYAS 489
            :||:: ||....::    |...:.|||||:|.:.|:                     .|:|||.|
Mouse   464 VYLIQGKTLRSEMNERNYFVRDKLDPDMALCRNARDMTLQREKDSPTPETFQMLSPPKGVFMYIS 528

  Fly   490 NLRIFGHLVNADDFNTTVTRPDFYTLFSNEIDWTEKYIHPNYSLQLNESNKIQQPCPDVYWFQIV 554
            |...||.|::..::||:....||:.:|.|.:||.||||:.:||....| |.::||||||:||.|.
Mouse   529 NRHEFGRLISTANYNTSHLNNDFWQIFENPVDWKEKYINRDYSKIFTE-NIVEQPCPDVFWFPIF 592

  Fly   555 SDAFCDDLVAIMEAHNGWSDGSNNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQMFVRPLQER 619
            |:..||:||..||.:..||.|.::|:|:.||||.|||.||||||:|||.::|.|::.|:.|:..:
Mouse   593 SERACDELVEEMEHYGKWSGGKHHDSRISGGYENVPTDDIHMKQIGLENVWLHFIREFIAPVTLK 657

  Fly   620 AFTGYFHNPPRALMNFMVRYRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCRFIRYNCSVT 684
            .|.||: ....||:||:|:|.|:.|.|||||||:||:|||||:|..|.|:|||||:|:|||||:.
Mouse   658 VFAGYY-TKGFALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIE 721

  Fly   685 DTKKGWMLMHPGRLTHYHEGLLVTNGTRYIMISFIDP 721
            ..:|||..||||||||.||||.|.||||||.:|||||
Mouse   722 SPRKGWSFMHPGRLTHLHEGLPVKNGTRYIAVSFIDP 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlodNP_648451.1 GT_LH 27..257 CDD:459235 98/232 (42%)
Glyco_tranf_GTA_type 303..>395 CDD:472172 30/92 (33%)
P4Hc 555..719 CDD:214780 94/163 (58%)
Plod2NP_001136388.1 GT_LH 37..266 CDD:459235 98/232 (42%)
P4Hc 593..756 CDD:214780 94/163 (58%)

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