DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plod and Plod1

DIOPT Version :10

Sequence 1:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_035252.1 Gene:Plod1 / 18822 MGIID:99907 Length:728 Species:Mus musculus


Alignment Length:736 Identity:321/736 - (43%)
Similarity:471/736 - (63%) Gaps:31/736 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ALLLL-----LLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWK 66
            :||||     ||.|.::.||:  ..|.:.|.||||:.|:|:.|:.|||:.::.::.:|||||:|.
Mouse     3 SLLLLAPLAWLLLVQAKDDAK--LEDNLLVLTVATKETEGFRRFKRSAQFFNYKIQSLGLGEDWS 65

  Fly    67 -GGDMQKPGGGFKLNLLREAIAPYKNEPETIILFTDSYDVIITTTLDEIFEKFKESGAKILFSAE 130
             .|.....|||.|:.||::|:..:.::.:.:|||.|||||:..:...|:.:||:::.::::||||
Mouse    66 VDGGPAAAGGGQKVRLLKKALEKHADKEDLVILFVDSYDVVFASGPRELLKKFQQAKSQVVFSAE 130

  Fly   131 KYCWPDKSLANDYPEV-EGKASRFLNSGAFIGYAPQVFALLVD-PIEDTADDQLYFTKIFLDETK 193
            ::.:||:.|...||.| :||  |||.||.||||||.:..|:.: ..:|:..|||::|||||:..|
Mouse   131 EHIYPDRRLEAKYPTVPDGK--RFLGSGGFIGYAPSLSKLVAEWEGQDSDSDQLFYTKIFLNPEK 193

  Fly   194 RAKLGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNVDFMTTPSIIHGNGLSKVDLNAYGN 258
            |.::.:.||.:.|:||||.||.::|.||.::...:.  :|:.:.|.|.::||||.:|:.||..||
Mouse   194 REQINISLDHRCRIFQNLDGALDEVVLKFEMGHVRA--RNLAYDTLPVVVHGNGPTKLQLNYLGN 256

  Fly   259 YLAR--TFNGVCLLCQENLLDLE---ETNLPVISLALMVTQPVPFFDQFLEGIESLNYPKEKLHL 318
            |:.|  ||...|.:|.|.|..|:   :..||.:.:.:.:.||.||...|...:..|.||::::.|
Mouse   257 YIPRFWTFETGCTVCDEGLRSLKGIGDEALPTVLVGVFIEQPTPFLSLFFLRLLRLRYPQKQMRL 321

  Fly   319 LIYSNVAFHDDDIKSFVNKHAKEYATAKFALSTDELDERQGRQLALDKARLHQS-DYIFFVDADA 382
            .|::....|...::.|:.:|..||.:.|.......:.....|.:..|..|..|: .|.|.||||.
Mouse   322 FIHNQERHHKLQVEQFLAEHGSEYQSVKLVGPEVRMANADARNMGADLCRQDQTCTYYFSVDADV 386

  Fly   383 HIDDGEVLRELLRLNKQFVAPIFSKHKELWSNFWGALSEGGYYARSHDYVDIVKRELIGMFNVPH 447
            .:.:...||.|:..||..:||:.::|..|||||||.||..||||||.||||||:...:|::|||:
Mouse   387 ALTEPNSLRLLIEQNKNVIAPLMTRHGRLWSNFWGGLSADGYYARSEDYVDIVQGRRVGVWNVPY 451

  Fly   448 VTSIYLVKKTAFDA-----ISFKHKEFDPDMAMCESLRNAGIFMYASNLRIFGHLVNADDFNTTV 507
            :::|||:|.:|..|     ..|.:.:.|.||:.|.::|...:||:.:|...||||::.|::.||.
Mouse   452 ISNIYLIKGSALRAELQNVDLFHYSKLDSDMSFCANVRQQEVFMFLTNRHTFGHLLSLDNYQTTH 516

  Fly   508 TRPDFYTLFSNEIDWTEKYIHPNYSLQLNESNKIQQPCPDVYWFQIVSDAFCDDLVAIMEAHNGW 572
            ...|.:.:|||..||.|||||.||:..| ....::.||||||||.|.::|.||:||..||.:..|
Mouse   517 LHNDLWEVFSNPEDWKEKYIHENYTKAL-AGKLVETPCPDVYWFPIFTEAACDELVEEMEHYGQW 580

  Fly   573 SDGSNNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQMFVRPLQERAFTGYFHNPPRALMN--F 635
            |.|.|.|||::||||.|||.||||.|:..||.:.|||..::.|:.|:.:.||:   .||..:  |
Mouse   581 SLGDNKDNRIQGGYENVPTIDIHMNQITFEREWHKFLVEYIAPMTEKLYPGYY---TRAQFDLAF 642

  Fly   636 MVRYRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCRFIRYNCSVTDTKKGWMLMHPGRLTH 700
            :|||:|||||||.||||:||:|:|||:||.|.||:||||||:||||||...:|||.|:|||||||
Mouse   643 VVRYKPDEQPSLMPHHDASTFTVNIALNRVGEDYEGGGCRFLRYNCSVRAPRKGWALLHPGRLTH 707

  Fly   701 YHEGLLVTNGTRYIMISFIDP 721
            |||||..|.|||||.:||:||
Mouse   708 YHEGLPTTKGTRYIAVSFVDP 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlodNP_648451.1 GT_LH 27..257 CDD:459235 94/232 (41%)
Glyco_tranf_GTA_type 303..>395 CDD:472172 24/92 (26%)
P4Hc 555..719 CDD:214780 98/165 (59%)
Plod1NP_035252.1 GT_LH1 26..255 CDD:438560 94/232 (41%)
P4Hc 563..726 CDD:214780 98/165 (59%)

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