DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plod and Plod

DIOPT Version :10

Sequence 1:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_321614.5 Gene:Plod / 1281666 VectorBaseID:AGAMI1_004093 Length:727 Species:Anopheles gambiae


Alignment Length:692 Identity:373/692 - (53%)
Similarity:505/692 - (72%) Gaps:1/692 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGDMQKPGGGFKLNLLREAIAPYKNEPET 95
            :||||:..|:||.||:|||:.||:.|||||:|:.|.||:|:..|||:|:||||||:.||:.:.:.
Mosquito    36 IFTVASNATEGYVRYLRSAKHYDLTVTTLGMGKPWLGGNMKSVGGGYKINLLREALKPYRADKDR 100

  Fly    96 IILFTDSYDVIITTTLDEIFEKFKESGAKILFSAEKYCWPDKSLANDYPEVEGKASRFLNSGAFI 160
            ::||||||||:......:|.|||....|.|:|.||.:||||:||.:.||.:||:..|:||||.|:
Mosquito   101 LVLFTDSYDVLFLAPWAKIQEKFASFEASIVFGAEGFCWPDESLKSAYPPLEGRGMRYLNSGLFM 165

  Fly   161 GYAPQVFALLVDPIEDTADDQLYFTKIFLDETKRAKLGLKLDVQSRLFQNLHGAKNDVKLKVDLE 225
            |||.:::.||..|::|..|||||:||.:|||..|.:|.:|||..:.|||||:|.:..|.|.::..
Mosquito   166 GYADKLYKLLKTPVKDAEDDQLYYTKAYLDEELRQELNIKLDHMATLFQNLNGVEEQVVLSLEPS 230

  Fly   226 SNQGVLQNVDFMTTPSIIHGNGLSKVDLNAYGNYLARTF-NGVCLLCQENLLDLEETNLPVISLA 289
            ..:..|.|.::.|.|:|:||||.||:.||:|.||||..| :|.|...:|..|.|.:..||::::|
Mosquito   231 EKEATLANSEYNTKPAIVHGNGPSKLTLNSYANYLAGAFVDGECQTVKEGRLTLSDGELPLVTMA 295

  Fly   290 LMVTQPVPFFDQFLEGIESLNYPKEKLHLLIYSNVAFHDDDIKSFVNKHAKEYATAKFALSTDEL 354
            |.|.:|.||.:::...|..||||.::|.:|::||||:|...:|:|::.....|.:.|......:.
Mosquito   296 LFVEKPTPFLEEWFGTIAKLNYPADRLDVLVHSNVAYHAGTVKAFLDAQEGRYRSLKVIEHDGDF 360

  Fly   355 DERQGRQLALDKARLHQSDYIFFVDADAHIDDGEVLRELLRLNKQFVAPIFSKHKELWSNFWGAL 419
            .|...|..|.....|...||:|.||::..:||..|||.|:..|:..:||:.::.:::||||||||
Mosquito   361 TETAARNFATKHCELRGCDYLFVVDSEGRLDDPNVLRALIEANRNVIAPVLTRPEKVWSNFWGAL 425

  Fly   420 SEGGYYARSHDYVDIVKRELIGMFNVPHVTSIYLVKKTAFDAISFKHKEFDPDMAMCESLRNAGI 484
            |..|:||||:||:|||.|:|:|::|||.|:.:||||:.....:|::.:|.|||||:|...|:.||
Mosquito   426 SGQGFYARSNDYMDIVGRKLLGLWNVPFVSIVYLVKRAVLPEVSYELQETDPDMALCWHFRSKGI 490

  Fly   485 FMYASNLRIFGHLVNADDFNTTVTRPDFYTLFSNEIDWTEKYIHPNYSLQLNESNKIQQPCPDVY 549
            ||:..|:..:|||::.:.|:.|.|.||||.||:|..||.::|:...|..||......||||||||
Mosquito   491 FMHVINVEQYGHLIDTEYFDMTRTHPDFYQLFNNRHDWEQRYLAHGYKQQLEADFVPQQPCPDVY 555

  Fly   550 WFQIVSDAFCDDLVAIMEAHNGWSDGSNNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQMFVR 614
            ||.|.||.|||||..|:||...|||||::|.||:|||||||||||||.|||||:|:|||||::||
Mosquito   556 WFAIGSDRFCDDLREIVEAFGEWSDGSHSDKRLQGGYEAVPTRDIHMNQVGLEQLWLKFLQLYVR 620

  Fly   615 PLQERAFTGYFHNPPRALMNFMVRYRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCRFIRY 679
            ||||:.|.||||:|||:||||:|||||||||||||||||||||||||:|.||:||:||||||:||
Mosquito   621 PLQEKVFIGYFHDPPRSLMNFVVRYRPDEQPSLRPHHDSSTYTINIALNTAGVDYEGGGCRFLRY 685

  Fly   680 NCSVTDTKKGWMLMHPGRLTHYHEGLLVTNGTRYIMISFIDP 721
            |||||||:|||||:|||||||:|||||.|.|||||||||:||
Mosquito   686 NCSVTDTRKGWMLLHPGRLTHFHEGLLTTKGTRYIMISFVDP 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlodNP_648451.1 GT_LH 27..257 CDD:459235 112/225 (50%)
Glyco_tranf_GTA_type 303..>395 CDD:472172 31/91 (34%)
P4Hc 555..719 CDD:214780 131/163 (80%)
PlodXP_321614.5 None

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