DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plod and plod2

DIOPT Version :10

Sequence 1:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001082933.1 Gene:plod2 / 100036767 ZFINID:ZDB-GENE-070326-1 Length:754 Species:Danio rerio


Alignment Length:751 Identity:317/751 - (42%)
Similarity:477/751 - (63%) Gaps:44/751 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLLLLAVTSQGDAESNWN---DKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69
            :|:|:..|......|:|.:   :|:.|.||||:.|||:.|:::||..::..|..||:||||||||
Zfish    11 VLMLVTCVHCTLGMETNKDIPTEKLLVLTVATQETDGFLRFMQSANYFNFNVKVLGMGEEWKGGD 75

  Fly    70 M-QKPGGGFKLNLLREAIAPYKNEPETIILFTDSYDVIITTTLDEIFEKFKESGAKILFSAEKYC 133
            : ...|||.|:.||:||:.....:.:.::||.||||:|.....:||..||::|..|::|:||...
Zfish    76 VGHSIGGGQKVRLLKEAMESLDQQEDLVVLFVDSYDLIFAGGAEEILRKFQQSNHKVVFAAEGII 140

  Fly   134 WPDKSLANDYPEV-EGKASRFLNSGAFIGYAPQVFALLVD-PIEDTADDQLYFTKIFLDETKRAK 196
            |||..||..||.| .||  ||||||..|||||.:..|:.. .:.|..||||::|||::|..:|.|
Zfish   141 WPDSQLAEKYPSVRSGK--RFLNSGGIIGYAPYIQKLVSQWDLHDNDDDQLFYTKIYVDPIQREK 203

  Fly   197 LGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNVDFMTTPSIIHGNGLSKVDLNAYGNYLA 261
            |.:.||.:..:||||:||.::|.||...|..:  ::|..:.:.|::||||..:||..|...||:.
Zfish   204 LNMTLDHKCEIFQNLNGALDEVLLKFGTERVR--VRNTIYNSLPAVIHGNVNTKVYFNYLANYIP 266

  Fly   262 RTFN---GVCLLCQENLLDLEE-TNLPVISLALMVTQPVPFFDQFLEGIESLNYPKEKLHLLIYS 322
            ..:|   | |.:|.::::||.: ...|.:::.:.:.||.||..:|||.:.||:|||:||::.|::
Zfish   267 NAWNYERG-CTICDQDMVDLSQLKEFPQVTVGVYIEQPTPFLPEFLERLLSLDYPKDKLNIFIHN 330

  Fly   323 NVAFHDDDIKSFVNKHAKEYATAKFALSTDELDERQGRQLALDKARLHQS-DYIFFVDADAHIDD 386
            :..:|:..|:.|..::...:.:.|.....:.|.:.:.|.:.:|..|...| ||.|.:|||..:.:
Zfish   331 SEVYHEKHIQKFWEENKDVFGSFKAVGPEENLTQGEARNMGMDVCRRDPSCDYFFNIDADVMLTN 395

  Fly   387 GEVLRELLRLNKQFVAPIFSKHKELWSNFWGALSEGGYYARSHDYVDIVKRELIGMFNVPHVTSI 451
            .:.|:.|:..|::.:||:.::|.:||||||||||..||||||.||:|||:.:.:|::|:|.:..:
Zfish   396 RQTLKLLIEQNRKIIAPLVTRHGKLWSNFWGALSLDGYYARSEDYIDIVQGKRVGVWNIPFLAHV 460

  Fly   452 YLVK-KTAFDAIS----FKHKEFDPDMAMCESLRN---------------------AGIFMYASN 490
            ||:| :|..:.:.    |..::.|||||||.:.|:                     .|:|||.:|
Zfish   461 YLIKGQTLRNELKERNVFVLEKLDPDMAMCRNARDLTVHRERESPSPESFHMLRSPKGLFMYLTN 525

  Fly   491 LRIFGHLVNADDFNTTVTRPDFYTLFSNEIDWTEKYIHPNYSLQLNESNKIQQPCPDVYWFQIVS 555
            ...||.|::..::||:....|.:.:|.|.:||.|||||.||:....| |.::||||||:||.::|
Zfish   526 RHEFGRLISTANYNTSHYNNDLWQIFENPLDWREKYIHANYTRIFTE-NLLEQPCPDVFWFPVLS 589

  Fly   556 DAFCDDLVAIMEAHNGWSDGSNNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQMFVRPLQERA 620
            :..|::||..||.|..||.|.:.|.|:.||||:|||.||||||:..::.:|.|::.|:.|:..:.
Zfish   590 EKACNELVEEMENHGTWSGGKHEDKRITGGYESVPTDDIHMKQINYDQEWLHFIREFISPVTLKV 654

  Fly   621 FTGYFHNPPRALMNFMVRYRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCRFIRYNCSVTD 685
            |:||: ....|:|||:|:|.||.|..|||||||||:|||||:|..|:|:.||||||.|||||:..
Zfish   655 FSGYY-TKGYAIMNFVVKYTPDRQAYLRPHHDSSTFTINIALNNKGLDFLGGGCRFHRYNCSIES 718

  Fly   686 TKKGWMLMHPGRLTHYHEGLLVTNGTRYIMISFIDP 721
            .:|||..||||||||.||||.||||||||.:||:||
Zfish   719 PRKGWSFMHPGRLTHLHEGLPVTNGTRYIAVSFVDP 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlodNP_648451.1 GT_LH 27..257 CDD:459235 102/232 (44%)
Glyco_tranf_GTA_type 303..>395 CDD:472172 27/92 (29%)
P4Hc 555..719 CDD:214780 93/163 (57%)
plod2NP_001082933.1 GT_LH 33..262 CDD:459235 102/232 (44%)
BcsA 289..>404 CDD:440828 33/114 (29%)
P4Hc 589..752 CDD:214780 93/163 (57%)

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