DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkt and PTPRS

DIOPT Version :9

Sequence 1:NP_648450.3 Gene:nkt / 39264 FlyBaseID:FBgn0036146 Length:162 Species:Drosophila melanogaster
Sequence 2:NP_002841.3 Gene:PTPRS / 5802 HGNCID:9681 Length:1948 Species:Homo sapiens


Alignment Length:71 Identity:22/71 - (30%)
Similarity:35/71 - (49%) Gaps:5/71 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VLGHKIAFLCVAKGNPRPHITWYKDGAEIYQHLYMHVHEWRIGDDKVKSKIEIDP-ATQMDAGLY 138
            |.|...:|:|.|.|:|:|.:||.|.|.::....:..:.    .|:...:.:.|.| .|..|..:|
Human    45 VSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIE----FDESAGAVLRIQPLRTPRDENVY 105

  Fly   139 ECTADN 144
            ||.|.|
Human   106 ECVAQN 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nktNP_648450.3 Ig 82..154 CDD:143165 20/64 (31%)
PTPRSNP_002841.3 Ig 32..120 CDD:299845 22/71 (31%)
I-set 33..124 CDD:254352 22/71 (31%)
Important for binding to glycosaminoglycan chains. /evidence=ECO:0000250|UniProtKB:B0V2N1 68..72 2/3 (67%)
IG_like 141..234 CDD:214653
Ig2_RPTP_IIa_LAR_like 152..235 CDD:143215
IG_like 251..328 CDD:214653
Ig3_RPTP_IIa_LAR_like 259..327 CDD:143216
FN3 332..421 CDD:238020
FN3 428..520 CDD:238020
FN3 525..613 CDD:238020
FN3 621..715 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 700..724
FN3 723..828 CDD:238020
FN3 838..920 CDD:238020
FN3 932..1029 CDD:238020
FN3 1037..>1097 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1311..1340
PTPc 1392..1647 CDD:214550
PTPc 1418..1647 CDD:238006
Substrate binding. /evidence=ECO:0000250 1589..1595
PTPc 1679..1938 CDD:214550
PTPc 1708..1938 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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