DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkt and Ptprf

DIOPT Version :9

Sequence 1:NP_648450.3 Gene:nkt / 39264 FlyBaseID:FBgn0036146 Length:162 Species:Drosophila melanogaster
Sequence 2:XP_038966081.1 Gene:Ptprf / 360406 RGDID:3453 Length:1928 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nktNP_648450.3 Ig 82..154 CDD:143165
PtprfXP_038966081.1 I-set 33..124 CDD:400151
Ig strand A 33..36 CDD:409353
Ig strand A' 42..45 CDD:409353
Ig strand B 50..57 CDD:409353
Ig strand C 63..68 CDD:409353
Ig strand C' 71..73 CDD:409353
Ig strand D 80..84 CDD:409353
Ig strand E 86..93 CDD:409353
Ig strand F 103..111 CDD:409353
Ig strand G 114..124 CDD:409353
IgI_2_RPTP_IIa_LAR_like 136..232 CDD:409400
Ig strand B 152..156 CDD:409400
Ig strand C 165..169 CDD:409400
Ig strand E 196..200 CDD:409400
Ig strand F 210..215 CDD:409400
Ig strand G 222..225 CDD:409400
IgI_3_RPTP_IIa_LAR_like 245..326 CDD:409401
Ig strand B 259..263 CDD:409401
Ig strand C 272..276 CDD:409401
Ig strand E 293..297 CDD:409401
Ig strand F 305..310 CDD:409401
Ig strand G 318..321 CDD:409401
FN3 329..418 CDD:238020
FN3 425..517 CDD:238020
FN3 522..611 CDD:238020
FN3 619..713 CDD:238020
FN3 720..826 CDD:238020
FN3 831..920 CDD:238020
FN3 929..1017 CDD:238020
FN3 1026..>1085 CDD:238020
PTP_DSP_cys 1356..1631 CDD:421693
R-PTP-F-2 1633..1923 CDD:350477
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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