DRSC/TRiP Functional Genomics Resources

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Protein Alignment nkt and ptprsa

DIOPT Version :9

Sequence 1:NP_648450.3 Gene:nkt / 39264 FlyBaseID:FBgn0036146 Length:162 Species:Drosophila melanogaster
Sequence 2:XP_021325154.1 Gene:ptprsa / 140820 ZFINID:ZDB-GENE-020107-3 Length:1945 Species:Danio rerio


Alignment Length:145 Identity:32/145 - (22%)
Similarity:52/145 - (35%) Gaps:45/145 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CEARRGRGRGRTKSRVQI--------GLPITGKYRDPESDQYYNNNNG--AKILQASHFDLEYVL 76
            |:|....|....::::.|        |.|              |.:.|  .|:::.:        
Zfish   105 CQAENSEGEINVQAKLSIIREDLLPPGFP--------------NIDMGPQLKVVERT-------- 147

  Fly    77 GHKIAFLCVAKGNPRPHITWYKDGAEI--------YQHLYMHVHEWRIGDDKVKSKIEIDPATQM 133
             .....||.|.|||.|.|||:||...|        .:.|.....|    ...::..::|:...:.
Zfish   148 -RTATMLCAASGNPDPEITWFKDFLPIDPNTSNGRIKQLRSEAFE----GTPIRGALQIENTEET 207

  Fly   134 DAGLYECTADNMYSI 148
            |.|.|||.|.|:..:
Zfish   208 DQGKYECVASNVEGV 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nktNP_648450.3 Ig 82..154 CDD:143165 23/75 (31%)
ptprsaXP_021325154.1 I-set 31..122 CDD:254352 3/16 (19%)
Ig2_RPTP_IIa_LAR_like 150..233 CDD:319301 23/77 (30%)
Ig3_RPTP_IIa_LAR_like 257..325 CDD:143216
FN3 330..419 CDD:238020
FN3 426..518 CDD:238020
FN3 523..612 CDD:238020
FN3 620..713 CDD:238020
fn3 721..819 CDD:306538
FN3 831..919 CDD:238020
fn3 931..1015 CDD:306538
FN3 1028..1101 CDD:238020
PTPc 1415..1644 CDD:238006
PTPc 1676..1935 CDD:214550
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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