DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7607 and PTPRD

DIOPT Version :9

Sequence 1:NP_648449.1 Gene:CG7607 / 39263 FlyBaseID:FBgn0036145 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_001364887.1 Gene:PTPRD / 5789 HGNCID:9668 Length:1932 Species:Homo sapiens


Alignment Length:71 Identity:25/71 - (35%)
Similarity:33/71 - (46%) Gaps:4/71 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RKITFFCMAQGNPRPTITWFKD----GAELYQHRFFQVHESHIEANIVKSKMEIDPTTQMDAGFY 143
            |..|..|.|.|||.|.||||||    .......|..|:....|....::..::|:.:.:.|.|.|
Human   141 RTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGGTPIRGALQIEQSEESDQGKY 205

  Fly   144 ECQADN 149
            ||.|.|
Human   206 ECVATN 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7607NP_648449.1 Ig_3 70..149 CDD:404760 24/69 (35%)
Ig strand B 85..89 CDD:409353 1/3 (33%)
Ig strand C 98..102 CDD:409353 2/3 (67%)
Ig strand E 123..132 CDD:409353 0/8 (0%)
Ig strand F 142..147 CDD:409353 3/4 (75%)
PTPRDNP_001364887.1 I-set 24..115 CDD:400151
Ig strand A' 32..36 CDD:409353
Ig strand B 39..48 CDD:409353
Ig strand C 54..59 CDD:409353
Ig strand C' 62..65 CDD:409353
Ig strand D 68..75 CDD:409353
Ig strand E 76..86 CDD:409353
Ig strand F 94..102 CDD:409353
Ig strand G 105..115 CDD:409353
IgI_2_RPTP_IIa_LAR_like 127..226 CDD:409400 25/71 (35%)
Ig strand B 143..147 CDD:409400 1/3 (33%)
Ig strand C 156..160 CDD:409400 2/3 (67%)
Interaction with IL1RAPL1. /evidence=ECO:0000250 180..189 1/8 (13%)
Mini-exon peptide A9, sufficient for interaction with IL1RAPL1. /evidence=ECO:0000250|UniProtKB:Q64487 181..189 1/7 (14%)
Ig strand E 190..194 CDD:409400 0/3 (0%)
Ig strand F 204..209 CDD:409400 3/4 (75%)
Ig strand G 216..219 CDD:409400
Mini-exon peptide B, required for interaction with SLITRK2 and in the function in pre-synaptic differentiation, Acts as an adjustable linker to control relative positions and orientations of the PTPRD second and third immunoglobilin domains for their simultaneous interactions with the first immunoglobilin domain of IL1RAPL1 and IL1RAP, Modulates affinity for IL1RAPL1 and IL1RAP. /evidence=ECO:0000250|UniProtKB:Q64487 227..230
IgI_3_RPTP_IIa_LAR_like 239..320 CDD:409401
Ig strand B 253..257 CDD:409401
Ig strand C 266..270 CDD:409401
Ig strand E 287..291 CDD:409401
Ig strand F 299..304 CDD:409401
Ig strand G 312..315 CDD:409401
FN3 323..412 CDD:238020
FN3 419..511 CDD:238020
FN3 516..604 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..623
FN3 612..706 CDD:238020
FN3 713..819 CDD:238020
FN3 824..919 CDD:238020
FN3 922..1013 CDD:238020
FN3 1023..>1084 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1304..1324
R-PTPc-D-1 1354..1637 CDD:350472
Substrate binding. /evidence=ECO:0000250 1573..1579
R-PTP-D-2 1638..1929 CDD:350476
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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