DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlcAT-P and B3gat3

DIOPT Version :9

Sequence 1:NP_001246713.1 Gene:GlcAT-P / 39262 FlyBaseID:FBgn0036144 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_077218.1 Gene:B3gat3 / 72727 MGIID:1919977 Length:335 Species:Mus musculus


Alignment Length:256 Identity:99/256 - (38%)
Similarity:142/256 - (55%) Gaps:26/256 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 RPTFVAASLP-----PPLYIITPTYRRPEQLAELTRLGYTLKHVVNLLWLVIEDANKTNPLVGHT 280
            ||..|.|..|     |.:|:|||||.|..|.|||.||..||..|..|.||::|||....|||...
Mouse    60 RPPPVPAQPPEPEALPTIYVITPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAESPTPLVSGL 124

  Fly   281 LDRIGVPYEYM--VAPMPEKYKQTKK--AKPRGVSNRNRGLEYLR-------------EHATEGV 328
            |...|:.:.::  :.|..::.::.:.  .:||||..||:.|::||             ...|:||
Mouse   125 LAASGLLFTHLAVLTPKAQRLREGEPGWVRPRGVEQRNKALDWLRGKGGAVGGEKDPPPPGTQGV 189

  Fly   329 LYFADDDNTYDISIFEQMRYISKVAMWPVGLVTKTGVSSPIIQAGKLVGYYDGWIGGRKYPVDMA 393
            :|||||||||...:|::||:...|::||||||.......|.:|.|::||::..|...|.:|:|||
Mouse   190 VYFADDDNTYSRELFKEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFHTAWEPNRPFPLDMA 254

  Fly   394 GFAVSVKFLKERPNAQMPFKP--GYEEDGFLRSLAPLDDAEIELLADECRDILTWHTQTKK 452
            ||||::..|..:||||.....  |:.|...|..|  :|..::|..|..|..:|.|||:|:|
Mouse   255 GFAVALPLLLAKPNAQFDATAPRGHLESSLLSHL--VDPKDLEPRAANCTQVLVWHTRTEK 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-PNP_001246713.1 GlcAT-I 231..452 CDD:132995 93/239 (39%)
B3gat3NP_077218.1 GlcAT-I 75..313 CDD:132995 93/239 (39%)
Interaction with galactose moiety of substrate glycoprotein. /evidence=ECO:0000250 243..252 3/8 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..335 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385244at33208
OrthoFinder 1 1.000 - - FOG0000504
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101385
Panther 1 1.100 - - O PTHR10896
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X314
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.