DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlcAT-P and glct-4

DIOPT Version :9

Sequence 1:NP_001246713.1 Gene:GlcAT-P / 39262 FlyBaseID:FBgn0036144 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_493114.2 Gene:glct-4 / 183560 WormBaseID:WBGene00008160 Length:301 Species:Caenorhabditis elegans


Alignment Length:250 Identity:83/250 - (33%)
Similarity:128/250 - (51%) Gaps:26/250 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 YKTRPTFVAASLPPPLYIITPTYRRPEQLAELTRLGYTLKHVVNLLWLVIEDANKTNPLVGHTLD 282
            :.|:||.::.|....:.::||||:|..::.::|||..||.||.||.|||:||.....|.|...|:
 Worm    40 FATKPTSISNSPNRMVIVVTPTYKRITRIPDMTRLANTLAHVENLHWLVVEDGYGIVPEVRQMLE 104

  Fly   283 RIGVPYEYMVAPMPEKYKQTKKAKPRGVSNRNRGLEYLREHATE--------GVLYFADDDNTYD 339
            |..:.|.||.      :|..|....||...|...|.|:|..:.:        .|:|||||||.||
 Worm   105 RTNLSYTYMA------HKTAKGYPSRGWYQRTMALRYIRSSSAKILGKQRNGAVVYFADDDNAYD 163

  Fly   340 ISIF-EQMRYISKVAMWPVGLVTKTGVSSPIIQAGKLVGYYDGWIGGRKYPVDMAGFAVSVKFLK 403
            :.:| :.:|.::.:.:|.||||....|.:|.:...|:..:...|...|::.|||||||:::|.:.
 Worm   164 VRLFTDYIRNVNTLGVWAVGLVGGVVVEAPKVVNQKVTAFNVRWALSRRFAVDMAGFAINLKLIL 228

  Fly   404 ERPNAQMPF------KPGYEEDGFLRSLA-PLDDAE-IELLADECRDILTWHTQT 450
               |:...|      ..|..|...|..:. .::|.| ....|.:.|||:.|||:|
 Worm   229 ---NSDAVFGTDCKRGEGAPETCLLEDMGLKMEDIEPFGYDATKVRDIMVWHTKT 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcAT-PNP_001246713.1 GlcAT-I 231..452 CDD:132995 78/236 (33%)
glct-4NP_493114.2 GlcAT-I 53..282 CDD:132995 78/236 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385244at33208
OrthoFinder 1 1.000 - - FOG0000504
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10896
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X314
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.880

Return to query results.
Submit another query.