DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GlcAT-P and b3gat1

DIOPT Version :9

Sequence 1:	NP_001246713.1	Gene:	GlcAT-P / 39262	FlyBaseID:	FBgn0036144	Length:	479	Species:	Drosophila melanogaster
Sequence 2:	NP_001090809.1	Gene:	b3gat1 / 100037907	XenbaseID:	XB-GENE-961613	Length:	347	Species:	Xenopus tropicalis

Alignment Length:	243	Identity:	102/243 - (41%)
Similarity:	141/243 - (58%)	Gaps:	22/243 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly   230 PPP-------LYIITPTYRRPEQLAELTRLGYTLKHVVNLLWLVIEDANKTNPLVGHTLDRIGVP 287
            |||       :::|||||.||.|.||||||..||.||.||.|:::||:.:..|||...|...|:.
Frog    89 PPPWMGNLPIIHVITPTYSRPVQKAELTRLSNTLLHVPNLHWILVEDSQRRTPLVTRLLQDSGLN 153

  Fly   288 YEYMVAPMPEKYK---QTKKAK-PRGVSNRNRGLEYLRE-----HATEGVLYFADDDNTYDISIF 343
            |.::....|..||   .|:..: |||...||..|.:|||     ::..||:|||||||||.:.:|
Frog   154 YTHLNVETPRNYKLRGDTRDPRIPRGTMQRNLALRWLRETFNRNNSLPGVVYFADDDNTYSLDLF 218

  Fly   344 EQMRYISKVAMWPVGLVTKTGVSSPIIQ-AGKLVGYYDGWIGGRKYPVDMAGFAVSVKFLKERPN 407
            |:||...||::|||..|......||.:. |||:.|:...:...|.:.:||||||::::.:.:||.
Frog   219 EEMRSTRKVSVWPVAFVGGLRYESPKVNAAGKVFGWKTVFDPHRPFAIDMAGFAINLRLILQRPQ 283

  Fly   408 AQMPF---KPGYEEDGFLRSLAPLDDAEIELLADECRDILTWHTQTKK 452
            |....   |.||:|...||.|..|:|  :|..||.|..||.|||:|:|
Frog   284 AYFKLRGVKGGYQESSLLRELVTLND--LEPKADNCTKILVWHTRTEK 329

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
GlcAT-P	NP_001246713.1	GlcAT-I	231..452	CDD:132995	100/240 (42%)
b3gat1	NP_001090809.1	GlcAT-I	97..329	CDD:132995	98/233 (42%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D385244at33208
OrthoFinder	1	1.000	-	-		FOG0000504
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3459
SonicParanoid	1	1.000	-	-		X314
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.950