DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14142 and Mindy4b

DIOPT Version :9

Sequence 1:NP_648447.2 Gene:CG14142 / 39261 FlyBaseID:FBgn0036143 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_038959839.1 Gene:Mindy4b / 108350017 RGDID:11362385 Length:484 Species:Rattus norvegicus


Alignment Length:434 Identity:125/434 - (28%)
Similarity:199/434 - (45%) Gaps:83/434 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GTPITAELATDLRNLVFGTAAIPMRAEWLQTSFVFGAPKEELAYGLRSPRNATRGLLSVVQGFVL 74
            |.||:..:||.|:..:||.....:.::|.:..|.|..|..:||:.|:..:...:.:...|||.::
  Rat   118 GFPISPAMATMLQRSLFGNTNQVLGSDWRKAHFKFHDPFSDLAFALQVEKGGAQSIQMAVQGSII 182

  Fly    75 KYLLFARKTSRVASLTDPLLATADMQREALFCALLEILRTISDKGKVTMVLPSEDEVFVDHSACY 139
            |||||||: .:..||......:...|.:||...|..||.......|..:...::|    .||...
  Rat   183 KYLLFARE-GKDCSLHSLCNLSQREQEQALAAVLAGILWAAGTAQKAIVCFVTKD----IHSTST 242

  Fly   140 F---HDSVTEKLYVFTLSPNDELEYFLKRNFKYFTEEETPGTLLFLYSAVLTRSMGKVRTDLDSA 201
            .   .|:..|:|.:|..|..:..|.|:..:.:.|..|.:.|.:|||||.||:|:..:::.||||.
  Rat   243 LDCSRDNFIERLQLFEFSEKEATEKFVYDHLQRFQGEGSHGVILFLYSLVLSRTFERLQKDLDST 307

  Fly   202 KSTPLTSSNHEEGSLM----IVTLLLTGRATPYIHNGVVNVGDESSYAVPQYGVLKRCMIGLLLW 262
            .:..|.|   :.|.::    ::.::|||||:|.:.||......|.:.    :|||.|..:|.|.|
  Rat   308 TTHLLQS---QAGGILCRQAVLNMILTGRASPNVFNGYEEGRSEGAL----HGVLTRSDVGYLQW 365

  Fly   263 DIESASAAVNQSRQPGSRLKTPNYPIWITSCTGHFGVIFNKNPDLLRNYHAESRFDVNYYSCSGH 327
            ..::|..  :|..|.|||||||.:|||:.:..|::.::|..|..||.::..|..||:::||....
  Rat   366 SKDTAEG--DQLSQVGSRLKTPVFPIWLCNINGNYSILFCTNRQLLSDWKMERVFDLHFYSGQPS 428

  Fly   328 Q---ILMTIDNRTYNEQALVMLERQPITPESTSMSGKEDGGGATSPTTVSGGGGAAAGGGVGGAS 389
            |   :.:|||  |::.|    .||          ...||..|                       
  Rat   429 QQRPVHLTID--THSHQ----WER----------GHHEDKRG----------------------- 454

  Fly   390 GGVGGAASGASGGNDVVAKEESTLNTPLQRLIRTKWEEATISFH 433
                   ||....:             |:.||||||.||||:::
  Rat   455 -------SGRRFSS-------------LEMLIRTKWREATINWN 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14142NP_648447.2 DUF4205 22..433 CDD:290609 119/420 (28%)
Mindy4bXP_038959839.1 DUF4205 130..479 CDD:404737 119/422 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 144 1.000 Domainoid score I4493
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I3999
OMA 1 1.010 - - QHG50181
OrthoDB 1 1.010 - - D1276386at2759
OrthoFinder 1 1.000 - - FOG0008139
OrthoInspector 1 1.000 - - otm46242
orthoMCL 1 0.900 - - OOG6_104874
Panther 1 1.100 - - O PTHR12473
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.980

Return to query results.
Submit another query.