DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adck5 and Coq8b

DIOPT Version :10

Sequence 1:NP_648446.1 Gene:Adck5 / 39260 FlyBaseID:FBgn0036142 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_001012065.1 Gene:Coq8b / 308453 RGDID:1311356 Length:528 Species:Rattus norvegicus


Alignment Length:392 Identity:94/392 - (23%)
Similarity:157/392 - (40%) Gaps:94/392 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LGTRIRGKRALNGL--------REANVQKGGRPVL------------RFSLLAAGAGGLAYD-GI 56
            |..|:...:...||        |||.::|..||.|            |.|.||: .||||.. |:
  Rat    42 LAQRVHQDQPGRGLTEDEIRRAREARLRKAPRPQLSDRSRERKVPASRISRLAS-FGGLAVGLGL 105

  Fly    57 VNDFTYCGASVRFVRSLKTAGLIAADYLRLDENDPEYETKVKLLHKKSAERLLETCLLNGGLYIK 121
                   ||.....:.....|.:            ::|.....|.:.:|||:::|.....|..:|
  Rat   106 -------GALAEVTKKSLPGGSL------------QHEGSSPFLTEANAERIVQTLCTVRGAALK 151

  Fly   122 VGQGFAAINDILPVEYTSTLSLLQDRCLPTTQADVQKVFRK-----DF---GQLPEEIYQEF--D 176
            :||                :..:||..|.:.|  :|:||.:     ||   .|:.:.:.:|.  |
  Rat   152 IGQ----------------MLSIQDNSLISPQ--LQRVFERVRQSADFMPRWQMMKVLEEELGKD 198

  Fly   177 YQ---------PVAAASLAQVFKARLPSGEQVAVKVQYNDLQKRFISDLGTIIFL----QDIVEF 228
            :|         |.||||:.||.:..|..|.:||||:||..:.:...||:..::.|    ..:.|.
  Rat   199 WQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAESIQSDVQNLLALLKMSVGLPEG 263

  Fly   229 FFKDYNFGWILNDLRKNLVLELNFLQEGQNAERCAKDMEKFSYVHVPKVHWSYTKTRVLTLEWMD 293
            .|.:.:    |..|::.|..|.::.:|...|:...|.:....:..||.|......||||.:|...
  Rat   264 LFAEQS----LQTLQQELAWECDYRREAACAQTFKKLLADDPFFRVPAVVEELCTTRVLGMELAG 324

  Fly   294 GCKISDLKTIEKEKLSLKDIDVKLFEAFAEQIFYTGFVHADPHPGN-IFVRKNRKNGRADIILLD 357
            |..:...:.:.::  ....|..:|......::|...|:..||:..| ::...:.|     :.|||
  Rat   325 GIPLDQCQGLSQD--IRNQICFQLLRLCLRELFEFRFMQTDPNWANFLYDASSHK-----VTLLD 382

  Fly   358 HG 359
            .|
  Rat   383 FG 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adck5NP_648446.1 ADCK1-like 144..395 CDD:270871 61/240 (25%)
Coq8bNP_001012065.1 KxGQ motif. /evidence=ECO:0000250|UniProtKB:Q8NI60 151..154 1/2 (50%)
ABC1_ADCK3 171..420 CDD:270872 56/225 (25%)
AAAS motif. /evidence=ECO:0000250|UniProtKB:Q8NI60 212..215 2/2 (100%)

Return to query results.
Submit another query.