DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IRSp53 and Pacsin3

DIOPT Version :9

Sequence 1:NP_729679.2 Gene:IRSp53 / 39258 FlyBaseID:FBgn0052082 Length:1076 Species:Drosophila melanogaster
Sequence 2:NP_001276606.1 Gene:Pacsin3 / 80708 MGIID:1891410 Length:424 Species:Mus musculus


Alignment Length:484 Identity:90/484 - (18%)
Similarity:163/484 - (33%) Gaps:164/484 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GVYRNILDRFNPG---------------------ARQL----------IAAGKSY---LKALHGA 42
            |.||..:.|...|                     |:||          :..|..|   .||.|..
Mouse    20 GNYRRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRGAVEKGPQYGTLEKAWHAF 84

  Fly    43 ATASRLFNEALAKI-----AMNAQQSGTGDIGSALMSVVNVNKEIQDQQMNILKAFYVDLLVPLE 102
            .||:...:|...::     ..::::..|...|:....|:...:|.:..:....||          
Mouse    85 FTAAERLSELHLEVREKLHGPDSERVRTWQRGAFHRPVLGGFRESRAAEDGFRKA---------- 139

  Fly   103 TNLEKDTKVVQHEQKKFLQQHKVRMESYQKAVSTMKKQRKKKATPEN--------TEKELRSLQ- 158
                         ||.:|::.| .:|:.:|:..|.:|..|...|.|:        ::::||.|| 
Mouse   140 -------------QKPWLKRLK-EVEASKKSYHTARKDEKTAQTRESHAKADSSMSQEQLRKLQE 190

  Fly   159 -----LLEDQKKKLDVFCDQSYKNAMTQERR---RYGFVLERQCSIAKHWMVYHTTGKTVIDNNF 215
                 ..|.:|.|      ..|:..:.:..|   ||...:|:.                     |
Mouse   191 RVGRCTKEAEKMK------TQYEQTLAELNRYTPRYMEDMEQA---------------------F 228

  Fly   216 ENWQEIAASREIIPPAAYESGYSTSNGHNNNNISSSSSSGNNNTSGNMRR-LERIKDGDD----D 275
            |:.|  ||.|:.:  ..::....|.:.|    :..|||...:....:::: :|...|.:|    .
Mouse   229 ESCQ--AAERQRL--LFFKDVLLTLHQH----LDLSSSDKFHELHRDLQQSIEAASDEEDLRWWR 285

  Fly   276 HLQGHGAQLKKSRSIDAPYGDMRTLHERENLSGLGGTGPAHYAQNSL----------PRAKSDFN 330
            ...|.|..:...:..:......|.:..:|.    ||..|......|:          |::.|.  
Mouse   286 STHGPGMAMNWPQFEEWSLDTQRAISRKEK----GGRSPDEVTLTSIVPTRDGTAPPPQSPSS-- 344

  Fly   331 LALVGTGQSSANKHKIIEEQLATLGDDQRGDQRP-------LVKALYAYMPSGENQLSFEEGDRI 388
               .|:||.                :|...::.|       .|:|||.|.....::|||..|:.:
Mouse   345 ---PGSGQD----------------EDWSDEESPRKVATGVRVRALYDYAGQEADELSFRAGEEL 390

  Fly   389 ALVGGK-AKGWQFGENLRTQHFGWFPVAY 416
            ..:..: .:||..|: |::...|.:|..|
Mouse   391 LKMSEEDEQGWCQGQ-LQSGRIGLYPANY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IRSp53NP_729679.2 I-BAR_IMD 4..222 CDD:153289 48/265 (18%)
SH3_Irsp53_BAIAP2L 364..419 CDD:212713 17/61 (28%)
Pacsin3NP_001276606.1 BAR 16..273 CDD:386243 56/311 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..184 6/29 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..362 12/74 (16%)
SH3_PACSIN3 365..420 CDD:212930 16/55 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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