DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaPi-III and PHT2;1

DIOPT Version :9

Sequence 1:NP_001261704.1 Gene:NaPi-III / 39255 FlyBaseID:FBgn0260795 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_189289.2 Gene:PHT2;1 / 822265 AraportID:AT3G26570 Length:613 Species:Arabidopsis thaliana


Alignment Length:645 Identity:184/645 - (28%)
Similarity:260/645 - (40%) Gaps:227/645 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LIAFVLAFGIGANDVANSFGTSVGSGVLTIRQACVLATICEISGAVLIGYKVSDTMRKGILEVGL 81
            |..|.:|:.||||||||:.|||||||.||||||.:.|.:.|.|||:|:|..|:.||:||||...:
plant   189 LFGFYMAWNIGANDVANAMGTSVGSGALTIRQAVMTAAVLEFSGALLMGTHVTSTMQKGILMANV 253

  Fly    82 YEGAEEVLMLGCVAALASSAVWLLVATFLKLPISGTHSIVGSTIGFSLVARGVQGLKWSTLGTIV 146
            ::|.:.:|..|.:::||::..||.||::...|:|.||.||||.:||.||..|...:.||:|..:.
plant   254 FQGKDMLLFAGLLSSLAAAGTWLQVASYYGWPVSTTHCIVGSMVGFGLVYGGAGAVFWSSLAKVA 318

  Fly   147 GSWFISPVLSGIVSILLFLAIRRFILRAQEPLKAGFRSLPIFYGVTFFINVISVVLDGPKLLYMD 211
            .||.|||:|..:||.|::..||||:..|..|.:|...:.|    |..|:.|.|:           
plant   319 SSWVISPILGALVSFLVYKCIRRFVYSAPNPGQAAAAAAP----VAVFVGVASI----------- 368

  Fly   212 NIPTWIALTASFGLSLLVALLTQLVVVPLQRRKIAKRLRAENPVKFNFEDSVESSPSGSPKKQRR 276
                     :|..|                                                   
plant   369 ---------SSAAL--------------------------------------------------- 373

  Fly   277 PLSLVSEGKPLPAIAEITELVSLSDNSPRTFKLAPFGLAAKNNNALGEEYKIDPQLIKKAEDLLG 341
            |||                            |:.|..|:......:......|..:.|:...||.
plant   374 PLS----------------------------KIFPIALSQALACGVAGAIVFDRIIRKQLGHLLA 410

  Fly   342 KASLDNTDLTITSLNFIDEQQQQQQQQQNGRKLQECFKRMQSPKEEQKSKTNSIGTDLETGSTKA 406
            |.                                      :|| |..:::..:||          
plant   411 KT--------------------------------------KSP-ETSQNQPKTIG---------- 426

  Fly   407 TNNNLQVVESGGSLDLMISSTLSPNSSKVPLIESKEALNEQEEELKRTTGGGRRTSGAEETPEIS 471
                            .:|....|..:::.::..                               
plant   427 ----------------FLSDIAGPTGTQLEIVYG------------------------------- 444

  Fly   472 MLFSFLQILTATFGSFAHGGNDVSNAIGPLIALYMIYREGSVMQQAE--SPIYILIYGGIGISVG 534
             :|.::|:|:|.|.||||||||||||||||.|...|.:.|:....||  .|:.:|.:||.||..|
plant   445 -IFGYMQVLSACFMSFAHGGNDVSNAIGPLAAALSILQNGAAAGGAEIVIPMDVLAWGGFGIVAG 508

  Fly   535 LWLWGRRVIETIGNDLTKITSSTGFTIEVGAAITVLLASKIGLPISTTHCKVGSVVFVGHVSASG 599
            |.:||.|||.|||..:|::|.:.||..|..||..||.|||:|||||.||..||:|:.||.  |.|
plant   509 LTMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGF--ARG 571

  Fly   600 RKKKSQPNDQTDKETHNEVAPMDDGSVDWHLFRNIAYAWIVTVPVTALLSAGMMYVLCAI 659
            .                       .||.....|.|..:|:||:||.|.|:....::...|
plant   572 L-----------------------NSVRAETVREIVASWLVTIPVGATLAVIYTWIFTKI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaPi-IIINP_001261704.1 PitA 8..>227 CDD:223383 86/209 (41%)
PHO4 29..>151 CDD:279693 59/121 (49%)
PitA <473..659 CDD:223383 79/187 (42%)
PHO4 <525..648 CDD:279693 50/122 (41%)
PHT2;1NP_189289.2 PitA 182..609 CDD:223383 184/645 (29%)
PHO4 201..597 CDD:279693 176/620 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 289 1.000 Domainoid score I365
eggNOG 1 0.900 - - E1_COG0306
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 296 1.000 Inparanoid score I806
OMA 1 1.010 - - QHG56462
OrthoDB 1 1.010 - - D712010at2759
OrthoFinder 1 1.000 - - FOG0001121
OrthoInspector 1 1.000 - - oto3061
orthoMCL 1 0.900 - - OOG6_100354
Panther 1 1.100 - - LDO PTHR11101
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X962
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

Return to query results.
Submit another query.