DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd1-like and AT4G38930

DIOPT Version :9

Sequence 1:NP_524023.1 Gene:Ufd1-like / 39254 FlyBaseID:FBgn0036136 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_001328898.1 Gene:AT4G38930 / 830048 AraportID:AT4G38930 Length:315 Species:Arabidopsis thaliana


Alignment Length:327 Identity:125/327 - (38%)
Similarity:178/327 - (54%) Gaps:37/327 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MFPEGRNFHA-----NYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNV 69
            ||.:|..:|.     .|:|:..|.:   ::..:|.|.||||||||||.|..|.::|||||:|.|.
plant     1 MFYDGYAYHGTTFEQTYRCYPSSFI---DKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNA 62

  Fly    70 KKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITN 134
            .....||.|||||:|:||..|:|:|||:||||.|||::.:.:|:||..|:.|.|||:||||||.|
plant    63 STDSFSHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTTDFLDIAN 127

  Fly   135 PKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKDHSE 199
            |||:||.||||::|||.||.|.:.||.|.|.:.::|.||.|.:||||.|..|:|..|:.||: .|
plant   128 PKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVDFAPPLDYKE-PE 191

  Fly   200 TQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDGK---------KKKESQLETPVV 255
            ...:.:..:|.|.....::|.|     |.....|.|||.||||:         ....:....||.
plant   192 RPVAPAPAKGEAKAKEVDVAEA-----EPKFNPFTGSGRRLDGRPLSYEPQPGAANSNGQSHPVA 251

  Fly   256 KKVLARGVPDYDFQFGLIRFDRNIRPIS----------DRSQEDDAVAGNADASDAESFHGTGFS 310
            ....:..........|.:.|..|:...:          ||.||::|    ...:..::|.|..:|
plant   252 SSSSSGSEKATQQNRGKLVFGSNVERSTKETTKVGAGKDRKQEEEA----EKEAKFQAFSGKKYS 312

  Fly   311 MK 312
            ::
plant   313 LR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd1-likeNP_524023.1 UFD1 4..316 CDD:227469 125/327 (38%)
UFD1 17..190 CDD:281187 92/177 (52%)
AT4G38930NP_001328898.1 UFD1 13..183 CDD:397321 91/172 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 208 1.000 Domainoid score I809
eggNOG 1 0.900 - - E1_COG5140
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39090
Inparanoid 1 1.050 223 1.000 Inparanoid score I1182
OMA 1 1.010 - - QHG53647
OrthoDB 1 1.010 - - D1134444at2759
OrthoFinder 1 1.000 - - FOG0003822
OrthoInspector 1 1.000 - - otm2608
orthoMCL 1 0.900 - - OOG6_101567
Panther 1 1.100 - - O PTHR12555
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2666
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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