DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd1-like and UFD1

DIOPT Version :9

Sequence 1:NP_524023.1 Gene:Ufd1-like / 39254 FlyBaseID:FBgn0036136 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_005650.2 Gene:UFD1 / 7353 HGNCID:12520 Length:307 Species:Homo sapiens


Alignment Length:326 Identity:185/326 - (56%)
Similarity:221/326 - (67%) Gaps:30/326 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFHFSGFNMMFPE--GRNFHANYKCFSVSMLPG-NERTDVEKGGKIIMPPSALDTLTRLNVEYPM 62
            ||.|:.|:...|.  ...|...|:|||||||.| |:|:||||||||||||||||.|:|||:.|||
Human     1 MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPM 65

  Fly    63 LFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHST 127
            ||||||....|.:|.||||||||||.||||||||:||||.||.::.:|||:|.|||:|||||.|.
Human    66 LFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSP 130

  Fly   128 DFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPV 192
            |||||||||||||||||||||||.||||||.||:|:|||.|:||||..|||||||||||:|:||:
Human   131 DFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPL 195

  Fly   193 GYKD------HSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDGKKKKESQLE 251
            |||:      |.|:....:...|.||.:|              ...|.|||.|||||||......
Human   196 GYKEPERQVQHEESTEGEADHSGYAGELG--------------FRAFSGSGNRLDGKKKGVEPSP 246

  Fly   252 TPVVKKVLARGVPDYDFQFGLIRFDRNIRPISDRSQEDDAVAGNADASDAESFHGTGFSM-KKTR 315
            :|:....:.||:|:|:|:.|.|.|.||.||:..:.:||:| .|...|     |.|.|.|: ||.|
Human   247 SPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEA-GGRFVA-----FSGEGQSLRKKGR 305

  Fly   316 K 316
            |
Human   306 K 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd1-likeNP_524023.1 UFD1 4..316 CDD:227469 181/321 (56%)
UFD1 17..190 CDD:281187 132/173 (76%)
UFD1NP_005650.2 UFD1 19..193 CDD:397321 132/173 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..258 11/26 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..307 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140739
Domainoid 1 1.000 276 1.000 Domainoid score I1754
eggNOG 1 0.900 - - E1_COG5140
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39090
Inparanoid 1 1.050 337 1.000 Inparanoid score I2399
Isobase 1 0.950 - 0 Normalized mean entropy S1050
OMA 1 1.010 - - QHG53647
OrthoDB 1 1.010 - - D1134444at2759
OrthoFinder 1 1.000 - - FOG0003822
OrthoInspector 1 1.000 - - oto88877
orthoMCL 1 0.900 - - OOG6_101567
Panther 1 1.100 - - LDO PTHR12555
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2330
SonicParanoid 1 1.000 - - X2666
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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