DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ufd1-like and Ufd1

DIOPT Version :9

Sequence 1:NP_524023.1 Gene:Ufd1-like / 39254 FlyBaseID:FBgn0036136 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_035802.3 Gene:Ufd1 / 22230 MGIID:109353 Length:307 Species:Mus musculus


Alignment Length:326 Identity:186/326 - (57%)
Similarity:221/326 - (67%) Gaps:30/326 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFHFSGFNMMFPE--GRNFHANYKCFSVSMLPG-NERTDVEKGGKIIMPPSALDTLTRLNVEYPM 62
            ||.|:.|:...|.  ...|...|:|||||||.| |:|:||||||||||||||||.|:|||:.|||
Mouse     1 MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPM 65

  Fly    63 LFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHST 127
            ||||||....|.:|.||||||||||.||||||||:||||.||.::.:|||:|.|||:|||||.|.
Mouse    66 LFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSP 130

  Fly   128 DFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPV 192
            |||||||||||||||||||||||.||||||.||:|:|||.|:||||..|||||||||||:|:||:
Mouse   131 DFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPL 195

  Fly   193 GYKD------HSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDGKKKKESQLE 251
            |||:      |.|:....:...|.||.||              ...|.|||.|||||||......
Mouse   196 GYKEPERPVQHEESIEGEADHSGYAGEVG--------------FRAFSGSGNRLDGKKKGVEPSP 246

  Fly   252 TPVVKKVLARGVPDYDFQFGLIRFDRNIRPISDRSQEDDAVAGNADASDAESFHGTGFSM-KKTR 315
            :|:....:.||:|:|:|:.|.|.|.||.||:..:.:||:| .|...|     |.|.|.|: ||.|
Mouse   247 SPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEA-GGRFIA-----FSGEGQSLRKKGR 305

  Fly   316 K 316
            |
Mouse   306 K 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ufd1-likeNP_524023.1 UFD1 4..316 CDD:227469 182/321 (57%)
UFD1 17..190 CDD:281187 132/173 (76%)
Ufd1NP_035802.3 UFD1 19..193 CDD:367358 132/173 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..255 11/24 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..307 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830712
Domainoid 1 1.000 276 1.000 Domainoid score I1728
eggNOG 1 0.900 - - E1_COG5140
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39090
Inparanoid 1 1.050 337 1.000 Inparanoid score I2374
Isobase 1 0.950 - 0 Normalized mean entropy S1050
OMA 1 1.010 - - QHG53647
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003822
OrthoInspector 1 1.000 - - oto92442
orthoMCL 1 0.900 - - OOG6_101567
Panther 1 1.100 - - LDO PTHR12555
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2330
SonicParanoid 1 1.000 - - X2666
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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