DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL2 and AT2G44065

DIOPT Version :10

Sequence 1:NP_524022.1 Gene:mRpL2 / 39253 FlyBaseID:FBgn0036135 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_566007.1 Gene:AT2G44065 / 819012 AraportID:AT2G44065 Length:214 Species:Arabidopsis thaliana


Alignment Length:150 Identity:48/150 - (32%)
Similarity:70/150 - (46%) Gaps:29/150 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILRK-FDEKVVVQLPSKREFAFQRTCMA 224
            |.:.|||.:.:||.||.:|.||||...::.||||...||:: ...|.:::|||.........|.|
plant    60 GSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRA 124

  Fly   225 TVGRLSNPEHNKEHVGSAQRMREMGNRPR--------------SGLWKRK-EGKHGRKIRRLPPM 274
            |:|.:|||.|..:.:..|.:.|.:|.||:              .|..|.| .|..||        
plant   125 TIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGR-------- 181

  Fly   275 TTISPPAPP-----KEEAIK 289
            |::||...|     |..::|
plant   182 TSVSPWGKPCKGGYKSASVK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL2NP_524022.1 RplB 37..>253 CDD:439860 35/92 (38%)
Ribosomal_L2_C 159..275 CDD:427606 42/129 (33%)
AT2G44065NP_566007.1 RplB <59..196 CDD:439860 46/143 (32%)

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