DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL2 and AT2G07715

DIOPT Version :9

Sequence 1:NP_524022.1 Gene:mRpL2 / 39253 FlyBaseID:FBgn0036135 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_178797.2 Gene:AT2G07715 / 815389 AraportID:AT2G07715 Length:389 Species:Arabidopsis thaliana


Alignment Length:276 Identity:59/276 - (21%)
Similarity:93/276 - (33%) Gaps:71/276 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KPGAGQQFRRTVHFPEKYTVEPLKITHLAGRDPVSGRLVAKGIGGGIKQQYRWVKWVRDGPTEGA 103
            :||..:..|       ::|:...|   .|||:. |||:.....|||.|:..|.:...|...:.|.
plant     2 RPGRARALR-------QFTLSTGK---SAGRNS-SGRITVFHRGGGSKRLLRRIDLKRSTSSMGI 55

  Fly   104 QEELVLEV-----------LRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIP-RIPV 156
            .|.:..:.           ::.||:.....:.......|.:..|.|..:|  |.:..|:| ::..
plant    56 VESIEYDPNRSSQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISG--LFSFSFLPGKVDK 118

  Fly   157 R------PNEGDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILRKFDEKVVVQLPSKRE 215
            |      |....||.:..||.|..    ..:..:.......||:..|:::.........|.:|||
plant   119 RKVACFSPGLMAAYVVVGLPTGMP----PLSSSKSAFASKGAGSTKTLVKDVFFSAFSSLKAKRE 179

  Fly   216 ---------FAFQRTCMATVGRLSNPEHNKEHVGSAQRMRE-------------MGNRPRSGLW- 257
                     |.|.|..:|          ..:....|.|||:             ...|..|.|| 
plant   180 TASLAFASSFGFPRIAVA----------GAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWA 234

  Fly   258 ---KRKEGKHGRKIRR 270
               |.|.|...:..||
plant   235 HRIKGKAGLSWQSFRR 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL2NP_524022.1 Ribosomal_L2 68..147 CDD:278605 20/89 (22%)
Ribosomal_L2_C 161..275 CDD:281880 29/136 (21%)
AT2G07715NP_178797.2 Ribosomal_L2 21..>72 CDD:278605 13/51 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0090
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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