DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxK and fkh

DIOPT Version :9

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster


Alignment Length:698 Identity:162/698 - (23%)
Similarity:222/698 - (31%) Gaps:284/698 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 SYVPATSSDAIDGHSPSLVVGGGGGVAGGGAHVIITPLPRDELHQQQLHHHQQQPHLQQQQHPHH 317
            |..|.:.:.:..|..||...|||||..|||.                                 .
  Fly    11 SSAPVSMASSGGGGPPSGGGGGGGGGGGGGP---------------------------------P 42

  Fly   318 PPAHHLPLQQQQQQQQPAHHPLPHTPHHPLHHTALHQQQQRSGSIVVAPPAGAAAHLIAGDGPGI 382
            ||:::.|        .|..:....:|.....:|.........|...|:|.|.|.......|....
  Fly    43 PPSNNNP--------NPTSNGGSMSPLARSAYTMNSMGLPVGGMSSVSPQAAATFSSSVLDSAAA 99

  Fly   383 YSPLKISIPKKEQKSPYLSPTGTISAA------NSC--PASPRQGFIQNQPNNY----------- 428
            .:.:..|:......|...|..|::.||      .:|  |:|.....:.:...|.           
  Fly   100 VASMSASMSASMSASMNASMNGSMGAAAMNSMGGNCMTPSSMSYASMGSPLGNMGGCMAMSAASM 164

  Fly   429 ------NNYG--------------NNNTQDLFQTPST--ASYNHNEKPPYSYAQLIVQAISAAPD 471
                  ..||              |:..:.....|:|  .||.| .||||||..||..||...|.
  Fly   165 SAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSYTH-AKPPYSYISLITMAIQNNPT 228

  Fly   472 KQLTLSGIYSFIVKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGA 536
            :.||||.||.||:..:|:||:...: |||||||:||.|..|:|:.|:.|:|||||||.:.||||.
  Fly   229 RMLTLSEIYQFIMDLFPFYRQNQQR-WQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGN 292

  Fly   537 KLIDHSYKKRRQR---------------------------------------------------- 549
            ...:..|.:|::|                                                    
  Fly   293 MFENGCYLRRQKRFKDEKKEAIRQLHKSPSHSSLEATSPGKKDHEDSHHMHHHHHSRLDHHQHHK 357

  Fly   550 -----------------------------------SSQ--------------------------- 552
                                               |.|                           
  Fly   358 EAGGASIAGVNVLSAAHSKDAEALAMLHANAELCLSQQPQHVPTHHHHQHHQLQQEELSAMMANR 422

  Fly   553 ---------------------GFRP---PYGMPRSAPVSP---------SHMDNSRESSPL---- 580
                                 |:.|   |:.:.|..|...         |........|||    
  Fly   423 CHPSLITDYHSSMHPLKQEPSGYTPSSHPFSINRLLPTESKADIKMYDMSQYAGYNALSPLTNSH 487

  Fly   581 ----QDIVLQS----AP-GSPGMSLEQ------RAADPEIIYNSQNAH-QQQQQQQQQQQQQTLS 629
                ||...||    || |:..:...|      ||  .:::.:.|..| |||.||.||||||...
  Fly   488 AALGQDSYYQSLGYHAPAGTTSLXHHQYPLAXGRA--EQMLRSQQQQHLQQQHQQHQQQQQQHQL 550

  Fly   630 NNSNQYSSGSPYYVTNQSSGVATPQTHVEGS------AASGGGGGGGVGALLALKRNHVMGGGAS 688
            :...|....|...:|:.|:   ||.|..:.|      :|||.|.|.|.|:          |...|
  Fly   551 HQQQQQMQQSAQQLTSASN---TPATSAKASGKAGSASASGSGSGSGSGS----------GSNYS 602

  Fly   689 Q------HTLHQQQAVAQQQH---SEIIYEELPTDYSGHI--EASEEE 725
            |      ....||||.|||||   .:.:.:||..| |.:|  :.|||:
  Fly   603 QKLQQQHQQQQQQQAAAQQQHHQQQQQLLQELQED-SSNITSDLSEEQ 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA <170..253 CDD:238017 162/698 (23%)
Forkhead 453..540 CDD:278670 47/86 (55%)
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 15/89 (17%)
FH 210..298 CDD:214627 47/88 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445516
Domainoid 1 1.000 104 1.000 Domainoid score I1720
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 1 1.000 - - otm46522
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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