DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxK and foxa1

DIOPT Version :10

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_989419.1 Gene:foxa1 / 395059 XenbaseID:XB-GENE-487352 Length:428 Species:Xenopus tropicalis


Alignment Length:378 Identity:111/378 - (29%)
Similarity:158/378 - (41%) Gaps:101/378 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 AGAAAHLIAGDGPGI------YSPLKISIPKKEQKSPYLSPTGTISAANSCPASPRQGFIQNQPN 426
            ||:|: .:.|.|.|:      .||..::....:|.|        |::.:....:|....:...|:
 Frog    84 AGSAS-AMNGMGSGVSSMGTALSPSSMNAMSAQQAS--------INSLSYSGMNPGMSPMAYGPS 139

  Fly   427 NYNNYGNNNTQDLFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYR 491
            |.|...:..|   |:    .||.| .||||||..||..||..||.|.||||.||.:|:..:.|||
 Frog   140 NMNRTRDTKT---FR----RSYPH-AKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFLYYR 196

  Fly   492 KETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQR------- 549
            :...: |||||||:||.|..|:|||||.|:|||||:|.:.||||....:..|.:|::|       
 Frog   197 QNQQR-WQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQQ 260

  Fly   550 ---SSQGFRPPYGMPRSAPVSPSHMDNSRESSPLQDIVLQSAPGSPGMSLEQRAADPEIIYNSQN 611
               .||..|...    |.|.||.|..:.: ||.:......|.|.|...|||         :|..|
 Frog   261 GGKGSQDGRKDV----SGPSSPLHRVHGK-SSQMDSSSSMSNPSSSPQSLE---------HNGSN 311

  Fly   612 AHQQQQ--------QQQQQQQQQTLSNNSNQYSSGSPYYVTNQSSGVATPQTHVEGSAASGGGGG 668
            ...:.|        ...|.....:|::.::.:..|.|:|..|....:                  
 Frog   312 GEMKPQVAAGPSPLSSHQNHSTHSLAHETHIHLKGDPHYSFNHPFSI------------------ 358

  Fly   669 GGVGALLALKRNHVMGGGASQHTL----HQQQAVAQQQHSEIIYEELPTDYSG 717
                       |::|.....||.|    ::|   |.||:|         .|||
 Frog   359 -----------NNLMSSSEQQHKLDFKAYEQ---ALQQYS---------SYSG 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA_FOXK 151..252 CDD:438740
FH_FOXK 453..531 CDD:410800 46/77 (60%)
foxa1NP_989419.1 Forkhead_N 17..157 CDD:369872 20/89 (22%)
FH_FOX 146..256 CDD:469596 58/118 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..337 20/93 (22%)
HNF_C 353..417 CDD:430552 14/77 (18%)
Blue background indicates that the domain is not in the aligned region.

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