DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxK and Foxp3

DIOPT Version :10

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_001101720.1 Gene:Foxp3 / 317382 RGDID:1562112 Length:429 Species:Rattus norvegicus


Alignment Length:407 Identity:96/407 - (23%)
Similarity:148/407 - (36%) Gaps:142/407 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 GGGGGVAG----GGAHV---IITPLPRDELHQQQL---------HHHQQQPHLQQ--QQHPH--H 317
            |.||...|    .|||.   .:.|||..:|....:         ......||||.  |..||  |
  Rat    40 GPGGPFQGRDLRSGAHTSSSSLNPLPPSQLQLPTVPLVMVAPSGARLGPSPHLQALLQDRPHFMH 104

  Fly   318 P----PAH-HLPLQQQQQQQQPAHHPLPHTPHHPLHHTALHQQQQRSG----------------- 360
            .    .|| |.|:.|.:....||...||    .|...|.:...:.|.|                 
  Rat   105 QLSTVDAHGHTPVLQVRPLDNPAMIGLP----PPTAATGVFSLKARPGLPPGINVASLEWVSREP 165

  Fly   361 ---------------SIVVAPPAGA-----------------------------AAHLIAGDGPG 381
                           |.::|.|.|:                             |.||:...|..
  Rat   166 ALLCTFPRSGTPRKDSNLLAAPQGSYPLLANGVCKWPGCEKAFEEPGEFLKHCQADHLLDEKGKA 230

  Fly   382 -------IYSPLKISIPKKEQK----SPYLS---------PTGTISAANSC-----------PA- 414
                   :...|:..:..:::|    ..:|:         |..::..::.|           || 
  Rat   231 QCLLQREVVQSLEQQLELEKEKLGAMQAHLAGKMALTKAPPVASVDKSSCCLVATSTQGSVLPAW 295

  Fly   415 -SPRQ---GFIQNQPNNYNNYGNNNTQDLFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQLT 475
             |||:   .....:.:.:.::||:...:.|.......| ||.:||::||.||..||..||::|.|
  Rat   296 SSPREASDSLFAVRRHLWGSHGNSTFPEFFHNMDYFKY-HNMRPPFTYATLIRWAILEAPERQRT 359

  Fly   476 LSGIYSFIVKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLID 540
            |:.||.:..:.:.|:|... ..|:|:|||||||::.|::|     |..||:.|.:|        :
  Rat   360 LNEIYHWFTRMFAYFRNHP-ATWKNAIRHNLSLHKCFVRV-----ESEKGAVWTVD--------E 410

  Fly   541 HSY-KKRRQRSSQGFRP 556
            ..: |||.||.|:...|
  Rat   411 FEFRKKRSQRPSKCSNP 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA_FOXK 151..252 CDD:438740
FH_FOXK 453..531 CDD:410800 32/77 (42%)
Foxp3NP_001101720.1 PHA03247 <1..137 CDD:223021 29/100 (29%)
FOXP-CC 193..260 CDD:465036 6/66 (9%)
FH_FOXP3 337..417 CDD:410840 34/93 (37%)
Blue background indicates that the domain is not in the aligned region.

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