DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxK and foxa

DIOPT Version :10

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_571357.2 Gene:foxa / 30539 ZFINID:ZDB-GENE-990415-76 Length:355 Species:Danio rerio


Alignment Length:396 Identity:101/396 - (25%)
Similarity:139/396 - (35%) Gaps:158/396 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 HHPPAHHLPLQQQQQQQQPAHHPLPHTPHHPLHHTALHQQQQRSGSIVVAPPAGAAAHLIAGDGP 380
            :.||.||......|....||.:|                  .|.||     |||.   |...:.|
Zfish    35 YSPPEHHYQSYGVQCDSAPAVNP------------------GRLGS-----PAGL---LPPANPP 73

  Fly   381 GIYSPLKISIPK-KEQKSPYLSPTGTISAANSCPASPRQGFIQNQPNNYNNYGNNNTQDLFQTPS 444
            ..|:.:..|.|: :|.||.|   ..|:|.|                                   
Zfish    74 KAYAEINSSEPEFQELKSVY---RRTLSHA----------------------------------- 100

  Fly   445 TASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYRKETNKGWQNSIRHNLSLN 509
                    ||||||..||..||..:|.|:|||:.||.:|.:.:||||:...: |||||||:||.|
Zfish   101 --------KPPYSYISLICMAIQQSPAKRLTLNEIYDWIRQLFPYYRQNQQR-WQNSIRHSLSFN 156

  Fly   510 RYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQR-----------SSQG---------- 553
            ..|::|.||.|.|||||:|.:.||||....:..|.:|::|           :|:|          
Zfish   157 DCFVRVPRSPDSPGKGSYWALHPDSGNMFENGCYMRRQKRFKCQKSTSTGKNSEGEDVKVEKKKK 221

  Fly   554 --------FRPP-----------YGMPRSAPVSPSHMDNSRESSPLQDIVLQ------SAPGSPG 593
                    .:.|           .....:.|.||||::.|....|.|...:.      |.|....
Zfish   222 KEIKSVSSCKSPTSDATKQSSTTVSYANTKPASPSHLNPSHTLFPTQPPEISTHLPSLSVPFPAS 286

  Fly   594 M---------SLEQRAADPEII-------------YNSQNAHQQQQQQQQQQQQQTLSNNSNQYS 636
            |         |..|..:.|.::             |...|:|.                |...|:
Zfish   287 METSLHCEPSSQHQPISVPRLVDFQYCETPVSYPLYCQSNSHA----------------NFPSYT 335

  Fly   637 SGSPYY 642
            :.|.||
Zfish   336 TDSVYY 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA_FOXK 151..252 CDD:438740
FH_FOXK 453..531 CDD:410800 43/77 (56%)
foxaNP_571357.2 FH_FOX 101..197 CDD:469596 49/96 (51%)
Blue background indicates that the domain is not in the aligned region.

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