DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxK and Foxa3

DIOPT Version :10

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_001420666.1 Gene:Foxa3 / 25100 RGDID:2809 Length:361 Species:Rattus norvegicus


Alignment Length:218 Identity:76/218 - (34%)
Similarity:101/218 - (46%) Gaps:33/218 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 QRSGSIVVAPPAGAAAHLIAGDGPGIYSPLKISIPKKEQKSPYLS------------------PT 403
            ||||..:....|...|.      ..:|||:. .:|.....:.|:|                  ||
  Rat    12 QRSGVHLPRRLADVRAE------SAVYSPVN-PVPTMAPLNSYMSLNPLSSPYPPGGLQASPLPT 69

  Fly   404 GTIS----AANSCPASPRQGFIQNQPNNYNNYGNNNTQDLFQTPSTASYNH---NEKPPYSYAQL 461
            |.::    .|...|..|..|.......:.:.||......:........|..   :.||||||..|
  Rat    70 GPLAPPAPTAPLGPTFPGLGAGSGTGGSASGYGAPGPGLVHGKEMAKGYRRPLAHAKPPYSYISL 134

  Fly   462 IVQAISAAPDKQLTLSGIYSFIVKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGS 526
            |..||..||.|.||||.||.:|:..:|||| |..:.|||||||:||.|..|:|||||.|:|||||
  Rat   135 ITMAIQQAPGKMLTLSEIYQWIMDLFPYYR-ENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGS 198

  Fly   527 FWRIDPDSGAKLIDHSYKKRRQR 549
            :|.:.|.||....:..|.:|::|
  Rat   199 YWALHPSSGNMFENGCYLRRQKR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA_FOXK 151..252 CDD:438740
FH_FOXK 453..531 CDD:410800 48/77 (62%)
Foxa3NP_001420666.1 FH_FOXA3 124..225 CDD:410814 54/99 (55%)
Blue background indicates that the domain is not in the aligned region.

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