DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxK and Foxa2

DIOPT Version :10

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_001386014.1 Gene:Foxa2 / 25099 RGDID:2808 Length:465 Species:Rattus norvegicus


Alignment Length:379 Identity:108/379 - (28%)
Similarity:150/379 - (39%) Gaps:109/379 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 VAPPAGAAAHL--------IAGDGPGIYSPLKISIPKKEQKSPYLSPTGTISAANSCPASPRQGF 420
            ::|.|||.|.:        :||.||.:              ||.|||.|..:|......:|....
  Rat    86 MSPGAGAMAGMSGSAGAAGVAGMGPHL--------------SPSLSPLGGQAAGAMGGLAPYANM 136

  Fly   421 IQNQPNNYNNYGNNNTQDLFQTPST--ASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFI 483
            ....| .|...|.:..:|    |.|  .||.| .||||||..||..||..:|:|.||||.||.:|
  Rat   137 NSMSP-MYGQAGLSRARD----PKTYRRSYTH-AKPPYSYISLITMAIQQSPNKMLTLSEIYQWI 195

  Fly   484 VKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQ 548
            :..:|:||:...: |||||||:||.|..|:||.||.|:|||||||.:.||||....:..|.:|::
  Rat   196 MDLFPFYRQNQQR-WQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQK 259

  Fly   549 R----------------SSQGFRPPYGMPR----------SAPVSPSHMDNSRES-SPLQD---- 582
            |                |..|.:...|...          ||..:|:..::...| ||.|:    
  Rat   260 RFKCEKQLALKEAAGAGSGGGKKTAPGTQASQVQLGEAAGSASETPAGTESPHSSASPCQEHKRG 324

  Fly   583 --IVLQSAPGS--------PGMSLEQRAA---------------------------DPEIIYNSQ 610
              ..|:..|.|        |....:|:||                           .|..|.|..
  Rat   325 GLSELKGTPASALSPPEPAPSPGQQQQAAAHLLVPPHHPGLPPEAHLKPEHHYAFNHPFSINNLM 389

  Fly   611 NAHQQQQQQQQQQQQQTLSNNSNQYSSGSPYYVTNQSSGVATPQTHVEGSAASG 664
            ::.||........|...:...:.:       .|.:...|..:|   :.||.|.|
  Rat   390 SSEQQHHHSHHHHQPHKMDLKTYE-------QVMHYPGGYGSP---MPGSLAMG 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA_FOXK 151..252 CDD:438740
FH_FOXK 453..531 CDD:410800 45/77 (58%)
Foxa2NP_001386014.1 Forkhead_N 23..164 CDD:369872 26/97 (27%)
FH_FOXA2 163..264 CDD:410813 53/102 (52%)
COG5025 <164..380 CDD:227358 69/216 (32%)
HNF_C 380..454 CDD:430552 13/64 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.