DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxK and Foxa1

DIOPT Version :10

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:XP_038967720.1 Gene:Foxa1 / 25098 RGDID:2807 Length:475 Species:Rattus norvegicus


Alignment Length:447 Identity:124/447 - (27%)
Similarity:175/447 - (39%) Gaps:123/447 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 SGSIVVAPPAGAAAHLIAGDGPGIYSPLKISIPKKEQKSPYLSPTGTISAANSCPASPRQGF--- 420
            |...|...|.|:|..:.:....|:.:           ....||| |.:.:..:.||:...|.   
  Rat    78 SPGAVAGMPGGSAGAMNSMTAAGVTA-----------MGAALSP-GGMGSMGAQPAASMNGLGPY 130

  Fly   421 ----------IQNQPNNY--NNYGNNNTQDLFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQ 473
                      :...|:|.  :..|.......|:    .||.| .||||||..||..||..||.|.
  Rat   131 AAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFK----RSYPH-AKPPYSYISLITMAIQQAPSKM 190

  Fly   474 LTLSGIYSFIVKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKL 538
            ||||.||.:|:..:||||:...: |||||||:||.|..|:|||||.|:|||||:|.:.||||...
  Rat   191 LTLSEIYQWIMDLFPYYRQNQQR-WQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMF 254

  Fly   539 IDHSYKKRRQR----------SSQGFRPPYGMPR-----SAPVSPSHMDNSRESSPLQDIV---- 584
            .:..|.:|::|          ...|.....|:|.     |.||:||      ..||:...|    
  Rat   255 ENGCYLRRQKRFKCEKQPGAGGGSGGGGSKGVPENRKDPSGPVNPS------AESPIHRGVHGKA 313

  Fly   585 --LQSAPGSPGMSLEQRAADPEIIYNSQNAHQQQQQQQQQQQQQTLSNNSNQYSSGSPYYVTNQS 647
              |:.|| :||     .||.|                      ||| ::|...::|....:.:.:
  Rat   314 SQLEGAP-APG-----PAASP----------------------QTL-DHSGATATGGASELKSPA 349

  Fly   648 SGVATPQTHVEGSAASGGGGGGGVG-----ALLALKR------------NHVMGGGASQHTLH-- 693
            |..|.|.:...|:.||........|     :.|.||.            |::|.....||.|.  
  Rat   350 SSSAPPISSGPGALASVPPSHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFK 414

  Fly   694 -QQQAVAQQQHSEIIYEELPTDYSGHIEASEEECVTTATDATV---AKRPKYVSEVL 746
             .:||:....:...:...||..           ..:.||.:.:   |..|.|..|.|
  Rat   415 AYEQALQYSPYGATLPASLPLG-----------SASVATRSPIEPSALEPAYYQESL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA_FOXK 151..252 CDD:438740
FH_FOXK 453..531 CDD:410800 47/77 (61%)
Foxa1XP_038967720.1 Forkhead_N 17..169 CDD:369872 20/107 (19%)
FH_FOXA1 157..268 CDD:410812 58/116 (50%)
HNF_C 393..457 CDD:430552 14/74 (19%)
Blue background indicates that the domain is not in the aligned region.

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