DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxK and Foxc1

DIOPT Version :9

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_032618.2 Gene:Foxc1 / 17300 MGIID:1347466 Length:553 Species:Mus musculus


Alignment Length:466 Identity:126/466 - (27%)
Similarity:180/466 - (38%) Gaps:149/466 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 SIVVAPPAG-------AAAHLIAGDGPGIYSPLKI-SIPKKEQKSPYLSPTGTISAANSCPASPR 417
            |:.|.|..|       |||....|....:.:|:.: |.|...::.|     |:::.|.. |.:| 
Mouse    12 SLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYP-----GSMARAYG-PYTP- 69

  Fly   418 QGFIQNQPNNYNNYGNNNTQDLFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGIYSF 482
                |.||           :|:.            ||||||..||..||..||||::||:|||.|
Mouse    70 ----QPQP-----------KDMV------------KPPYSYIALITMAIQNAPDKKITLNGIYQF 107

  Fly   483 IVKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRR 547
            |:..:|:|| :..:|||||||||||||..|:||.|...:|||||:|.:||||.....:.|:.:||
Mouse   108 IMDRFPFYR-DNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRR 171

  Fly   548 QRSS----------------QGFRPPYGMPRSAPVSPSHMDNSR---ESSP--LQDIVLQS---- 587
            :|..                |...||....:.||..|...:.|.   :..|  :|||..::    
Mouse   172 RRFKKKDAVKDKEEKGRLHLQEPPPPQAGRQPAPAPPEQAEGSAPGPQPPPVRIQDIKTENGTCP 236

  Fly   588 ------------------------APGSPGMSLEQRAADPEIIYNSQNAHQQQQQQQQQQQQQTL 628
                                    :|.|...||...::.|..:.:::.......:.....|....
Mouse   237 SPPQPLSPAAALGSGSAATVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDAAEPAPPPQPAPP 301

  Fly   629 SNNSNQYS--------SGSPY------------------------------YVTNQSSGVATP-- 653
            .::|..:|        .|||.                              |...|||..::|  
Mouse   302 PHHSQGFSVDNIMTSLRGSPQGSAAELGSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCS 366

  Fly   654 QTHVEGSAASGGGGGGGVGALLALKRNHVMGGGASQHTLHQQ-------------QAVAQQQHSE 705
            |:...||:..|||||||.|...:....   ||.|:.|...|.             |..|....|.
Mouse   367 QSSSAGSSGGGGGGGGGGGGSSSAAGT---GGAATYHCNLQAMSLYAAGERGGHLQGPAGGAGSA 428

  Fly   706 IIYEELPTDYS 716
            .:.:.|| |||
Mouse   429 AVDDPLP-DYS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA <170..253 CDD:238017
Forkhead 453..540 CDD:278670 51/86 (59%)
Foxc1NP_032618.2 Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 1..51 10/38 (26%)
FH 78..166 CDD:214627 51/88 (58%)
Nuclear localization signal 1 (NLS 1). /evidence=ECO:0000250|UniProtKB:Q12948 78..93 10/14 (71%)
Nuclear localization signal 2 (NLS 2). /evidence=ECO:0000250|UniProtKB:Q12948 168..176 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..326 23/152 (15%)
Required for transcriptional inhibition. /evidence=ECO:0000250|UniProtKB:Q12948 217..366 20/148 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..393 15/36 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..466 7/20 (35%)
Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 466..553
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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