DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxK and Foxn1

DIOPT Version :10

Sequence 1:NP_001261701.1 Gene:FoxK / 39252 FlyBaseID:FBgn0036134 Length:760 Species:Drosophila melanogaster
Sequence 2:XP_006532328.1 Gene:Foxn1 / 15218 MGIID:102949 Length:704 Species:Mus musculus


Alignment Length:521 Identity:114/521 - (21%)
Similarity:163/521 - (31%) Gaps:226/521 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 ATSSDAIDGHS-------------PSLVVGGGGGVAGGGAHVIITPLPRD----ELHQQQLHHHQ 304
            |.::.|:||||             |         |..|.|...:...|.:    :|......|:|
Mouse   194 AQTAMALDGHSFKTQGALEAFEEIP---------VDMGDAEAFLPSFPAEAWCNKLPYPSQEHNQ 249

  Fly   305 QQPHLQQQQHPHHPPA---------HHLPLQQQQQQQQPAHH---------PLPH--TPHHPLHH 349
               .||..:....|.|         :..|||......|||.|         |:|:  :||:|   
Mouse   250 ---ILQGSEVKVKPQALDSGPGMYCYQPPLQHMYCSSQPAFHQYSPGGGSYPVPYLGSPHYP--- 308

  Fly   350 TALHQQQQRSGSIVVAPPAGAAAHLIAGDGPGIYSPLKISIPKKEQKSPYLSPTGTISAANSCPA 414
                  .||     :||.|.|..|                                         
Mouse   309 ------YQR-----IAPQANAEGH----------------------------------------- 321

  Fly   415 SPRQGFIQNQPNNYNNYGNNNTQDLFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGI 479
                                  |.||           .||.|||:.||..|:..:....|.:|.|
Mouse   322 ----------------------QPLF-----------PKPIYSYSILIFMALKNSKTGSLPVSEI 353

  Fly   480 YSFIVKHYPYYRKETNKGWQNSIRHNLSLNRYFIKVA-RSQDEPGKGSFWRIDPDSGAKLIDHSY 543
            |:|:.:|:||: |....||:||:|||||||:.|.||. :|.....||..|.::|....|:.:...
Mouse   354 YNFMTEHFPYF-KTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPSKIDKMQEELQ 417

  Fly   544 KKRR----------------------QRSSQGFR----PPYGMPRSAPV---------------- 566
            |.:|                      :|...|..    ||.|:....|:                
Mouse   418 KWKRKDPIAVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLAGPGPIRPMAPSAGLSQPLHPM 482

  Fly   567 --SPSHMDNSRESSPLQDIVLQSAPGSPGMSLEQRAADPEIIYNSQNAHQQQQQQQQQQQQQTLS 629
              :|..|..   .:||||::...||...|.:...  ..|.:   :.:.|||....|.....:.  
Mouse   483 HPAPGPMPG---KNPLQDLLGGHAPSCYGQTYPH--LSPSL---APSGHQQPLFPQPDGHLEL-- 537

  Fly   630 NNSNQYSSGSPYYVTNQSSGVA--TPQTHVEGSAASGGGGGGGVGALLALKRNHVMGGGASQHTL 692
                |...|:|     |.|.:.  ||.:|               ||.|       |...:|..|:
Mouse   538 ----QAQPGTP-----QDSPLPAHTPPSH---------------GAKL-------MAEPSSARTM 571

  Fly   693 H 693
            |
Mouse   572 H 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxKNP_001261701.1 FHA_FOXK 151..252 CDD:438740
FH_FOXK 453..531 CDD:410800 35/78 (45%)
Foxn1XP_006532328.1 FH_FOXN1 326..422 CDD:410830 38/96 (40%)
Blue background indicates that the domain is not in the aligned region.

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