Protein Alignment Sod1 and CCS

DIOPT Version :10

• Sequence 1: NP_476735.1
• Gene: Sod1 / 39251
• FlyBaseID: FBgn0003462
• Length: 153
• Species: Drosophila melanogaster
• Sequence 2: NP_563910.2
• Gene: CCS / 837808
• AraportID: AT1G12520
• Length: 320
• Species: Arabidopsis thaliana
• Alignment Length: 145
• Identity: 48/145 - (33%)
• Similarity: 70/145 - (48%)
• Gaps: 12/145 - (8%)

  Fly     1 MVVKAVCVING-DAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFN 64
            :|..||....| |..|.|.|.|.|... .::.....||:.|.|.:.::|:||.|||..|:|..:|
plant   160 LVSAAVAEFKGPDIFGVVRFAQVSMEL-ARIEANFTGLSPGTHSWCINEYGDLTNGAASTGSLYN 223

  Fly    65 PYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGG 129
            |:..:.|     ...|||||.:||  |...:...:..|..|..|| :|||.|||:...|:  :.|
plant   224 PFQDQTG-----TEPLGDLGTLEA--DKNGEAFYSGKKEKLKVAD-LIGRAVVVYKTDDN--KSG 278

  Fly   130 HELSKSTGNAGARIG 144
            ..|:.:.....|.:|
plant   279 PGLTAAVIARSAGVG 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sod1	NP_476735.1	Cu-Zn_Superoxide_Dismutase	2..150	CDD:469976	48/144 (33%)
CCS	NP_563910.2	PLN02957	82..320	CDD:215516	48/145 (33%)