DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sod1 and LOC1272692

DIOPT Version :10

Sequence 1:NP_476735.1 Gene:Sod1 / 39251 FlyBaseID:FBgn0003462 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_311594.2 Gene:LOC1272692 / 1272692 VectorBaseID:AGAMI1_010435 Length:153 Species:Anopheles gambiae


Alignment Length:169 Identity:35/169 - (20%)
Similarity:58/169 - (34%) Gaps:59/169 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RPGQSR-----ITTPRKETDTCRISSGVSEGMTTGTPIHVFVPNTDQRGLDYSEMSVAYRPSHAD 157
            ||..:|     |..|.|:.....::.|:...:.....:....||.|..|.|         ||: :
Mosquito   105 RPAPNRAEVKYIALPNKKEQLTMVTLGIGHDVKAEIRLKELYPNIDFHGSD---------PSN-E 159

  Fly   158 ATYDM-------KYGVRSVQG-GGRSSAR-----------ETIGRVAPGALAKKILKQFA----- 198
            ...|:       ||...:|.| .|..::|           |.:|       |:..||.|.     
Mosquito   160 INRDLYENKLGGKYYQYAVSGEKGMKNSRVYREEYKEEITEHVG-------AEYFLKNFVRKDRV 217

  Fly   199 --------GTEILAYVSQVHHVVLPEELVDHENLTLEQI 229
                    |.| .:::.|:|:    ...:|.|.:.:.||
Mosquito   218 DILWIDIEGNE-FSFLEQIHN----GGTIDKEGIKICQI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sod1NP_476735.1 Cu-Zn_Superoxide_Dismutase 2..150 CDD:469976 12/56 (21%)
LOC1272692XP_311594.2 Sod_Cu 13..148 CDD:459663 7/42 (17%)

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