Protein Alignment Sod1 and Ccs

DIOPT Version :10

• Sequence 1: NP_476735.1
• Gene: Sod1 / 39251
• FlyBaseID: FBgn0003462
• Length: 153
• Species: Drosophila melanogaster
• Sequence 2: XP_308747.5
• Gene: Ccs / 1270080
• VectorBaseID: AGAMI1_012400
• Length: 253
• Species: Anopheles gambiae
• Alignment Length: 148
• Identity: 40/148 - (27%)
• Similarity: 61/148 - (41%)
• Gaps: 50/148 - (33%)

  Fly    12 DAKGTVFFEQESSGTP----VKVSGEVCGLA-KGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHG 71
            :.:|.:.|...|| ||    ..|.|.:.||: .|....:|||.||.:.||.|.|..::      .
Mosquito   102 NVRGVIRFCTLSS-TPGQKGAVVDGTIDGLSHSGTFQLNVHECGDISAGCSSVGDVYD------S 159

  Fly    72 APV--DENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSK 134
            :|:  |||..    ..|....|   ::::.|          :|||:||:...|:
Mosquito   160 SPIRSDENGR----ATIRFVND---RLDVND----------LIGRSVVITQPAE----------- 196

  Fly   135 STGNAGA----RIGCGVI 148
                |||    |:.||:|
Mosquito   197 ----AGAQEERRLSCGII 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sod1	NP_476735.1	Cu-Zn_Superoxide_Dismutase	2..150	CDD:469976	40/148 (27%)
Ccs	XP_308747.5	None