DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7638 and AT5G52180

DIOPT Version :9

Sequence 1:NP_648439.1 Gene:CG7638 / 39250 FlyBaseID:FBgn0036133 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_200031.1 Gene:AT5G52180 / 835294 AraportID:AT5G52180 Length:458 Species:Arabidopsis thaliana


Alignment Length:545 Identity:119/545 - (21%)
Similarity:207/545 - (37%) Gaps:154/545 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LGAQLVITLVMVSVIQKLSPHYSFAK-WILCRTGLYRYLHP-------TDDELR------SRGGV 54
            |..|::::|.:..|:       ||.| .|:...||..|:.|       |.:.||      |....
plant    11 LTLQILLSLFLTLVL-------SFVKISIIFLHGLCTYIQPENLNQNNTGNGLRPAIRRPSSTDD 68

  Fly    55 PKEKPPKGGRNKQANGSG-GAAGAQ-FHIPRSIEVELLTSPVLERDVVHLR---YFTEYQWLLDF 114
            ||.......||:..:.|. ..:.|| |.|.            |:.|  |||   |||||..|...
plant    69 PKSNVEVRRRNRSKDKSEFDESNAQIFRIK------------LDED--HLRSRMYFTEYNSLFVI 119

  Fly   115 SVYTGIVYVVSELFHFYYPLRHEV-NLSMVWCLLVIFFAL----KLLSSLTVLYFQSEESIGERS 174
            |......:::.:.|.......|.| :..:::.:::.|.||    ..|..:::....|:||  |:.
plant   120 SFLAVSCFLLDKYFGIIEDNSHGVLSNGLMFPIVLGFIALCKVFVALGKISIERSASKES--EKR 182

  Fly   175 MVIVACLVYLLVAMVV-LIVDERILETGLEDAYASFNASASKFLTEQGLPSSGPASKIVVKFFLA 238
            :    .|::.::..|. :|:...:...|.:....|.:|...                ||:.|  :
plant   183 L----SLIFGVLGFVFGIIISAGVFPKGFDFQLGSVDAFCC----------------IVISF--S 225

  Fly   239 MGCGLLGSLFTFPGLRMAKMHWDSLKYCRGNRLL-------QVLLNLSFVLPFILVILWIRPISR 296
            |.|  :|.....|..|.|:..|......|.|..:       :::|..::::.....:|||.|:: 
plant   226 MAC--IGGFLYMPAGRSARSFWVGTDQIRSNLSIISCGWFGRMILYANYIVSVFTSLLWIHPLA- 287

  Fly   297 DYLTVR------VFQGMQQPLLKPHV------FETLRLLLVIFVVVVRFALMPIYLQSYLNLAHD 349
            :.|..|      ......|..|..:|      |...|:|.::...:::...:...||.:||   :
plant   288 EVLVKRSGDPGTSGSSQSQSGLVGNVGMLSDDFAKFRVLCLLLSGLLQAMAVRPNLQMFLN---E 349

  Fly   350 KIMD--LRKEAGRITNVEFKQKISSIF---YYLCVVTLQFAAPLIL-CLYLTLMYKSLGGFSWSG 408
            .::.  .|....:..:::|.:  :.:|   :|||:|.|||.||.:| .|:|.|....|..|:.|.
plant   350 AVLSWYQRLHGSKTPDLDFSR--AKMFLHNHYLCLVALQFLAPSVLVILFLGLSQIDLSSFAVSQ 412

  Fly   409 IFRESVVLQHECAASETEGAGVAVSQGDGDFNIIESAQSLQASFSSLKNVFSTEVYKGFLGFATW 473
            :...|:    .|:                ||               :|.|       |.|  .:|
plant   413 LVCGSL----PCS----------------DF---------------IKQV-------GLL--MSW 433

  Fly   474 WSYFTL--FATSSL-----GIVYQS 491
            |..|..  |.::||     |::|.|
plant   434 WVLFVWSGFTSASLVFYRRGVLYVS 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7638NP_648439.1 Tmemb_161AB 2..493 CDD:287270 119/545 (22%)
AT5G52180NP_200031.1 Tmemb_161AB <220..452 CDD:287270 62/285 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D734854at2759
OrthoFinder 1 1.000 - - FOG0002601
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13624
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

Return to query results.
Submit another query.