DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68beta and elovl6

DIOPT Version :9

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001017257.2 Gene:elovl6 / 550011 XenbaseID:XB-GENE-942876 Length:265 Species:Xenopus tropicalis


Alignment Length:254 Identity:75/254 - (29%)
Similarity:110/254 - (43%) Gaps:46/254 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QDWPLVKSPWNIIALLALYLLMVRYAPKWTARCKPLQLRVPLFCHSLAM----IF----LNGYIC 83
            ::|   |..:...||.|.::...|:..|   :.:..:||.||...||::    ||    ...|:.
 Frog    28 ENW---KKSFLFSALYAAFIFGGRHLMK---QREKFELRKPLILWSLSLAVFSIFGAVRTGAYML 86

  Fly    84 LEFLTASLSLGYNFACQECRVSHDPHEIRIAAAMWW---FYISKILEFVDTAFFILRHKWNQLSF 145
            ...:|..|.   ...|.: ...:.|      .:.:|   |.:||..|..||.|.|||.:  :|.|
 Frog    87 YILMTKGLK---QSVCDQ-SFYYGP------VSKFWAYAFVLSKAPELGDTIFIILRKQ--KLIF 139

  Fly   146 LHVYHHSTMFLFCWTYVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRVQRFLWWKRYLTGL 210
            ||.|||.|:.|:.|...|.:..|..:|.:| |..||.:|||||||...|.||.|     ::...:
 Frog   140 LHWYHHITVLLYSWYSYKDMVAGGGWFMTM-NYGVHAVMYSYYALRAAGFRVSR-----KFAMLI 198

  Fly   211 QLVQFT--IIFFWASQLVFRGCEYGK---------WLTPIGAAYMVPFLFMFGRFYAQK 258
            .|.|.|  ||....:.|||...:.|:         |.:.:..:|.|.|...|...|..|
 Frog   199 TLSQITQMIIGCVVNYLVFSWMQQGQCPSHVQNIVWSSIMYLSYFVLFCHFFFEAYITK 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:279492 70/233 (30%)
elovl6NP_001017257.2 ELO 25..262 CDD:366492 75/254 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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