DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elo68beta and elovl7b

DIOPT Version :9

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_956072.1 Gene:elovl7b / 327274 ZFINID:ZDB-GENE-030131-5485 Length:282 Species:Danio rerio


Alignment Length:242 Identity:97/242 - (40%)
Similarity:141/242 - (58%) Gaps:5/242 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ADERTQDWPLVKSPWNIIALLALYLLMV-RYAPKWTARCKPLQLRVPLFCHSLAMIFLNGYICLE 85
            ||.||.:|.|:.||:....::|.|:..| ...|:.....||.||:..:..::|:::..:.|:..|
Zfish    21 ADPRTGNWLLMGSPFPQTFIIAAYVFFVTTLGPRLMENRKPFQLKNTMIIYNLSIVLFSLYMIYE 85

  Fly    86 FLTASLSLGYNFACQECRVSHDPHEIRIAAAMWWFYISKILEFVDTAFFILRHKWNQLSFLHVYH 150
            ||.:..:.||.:.|.....|..|..:|:|...|.:|.||.:|.:||.||:||.|.:|:|||||||
Zfish    86 FLMSGWANGYTYRCDLVDYSSSPQALRMAWTCWLYYFSKFIEMLDTVFFVLRKKSSQVSFLHVYH 150

  Fly   151 HSTMFLFCWTYVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRVQRFLWWKRYLTGLQLVQF 215
            ||.|....|..|::.|.|...|.:::|..|||||||||.||.|||:.|::||||:|:|.:|||||
Zfish   151 HSIMPFTWWFGVRFAPGGLGTFHALLNCIVHVIMYSYYLLSALGPKYQKYLWWKKYMTTIQLVQF 215

  Fly   216 TIIFFWASQLVF-RGCEY--GKWLTPIGAAYMVPFLFMFGRFYAQKY 259
            .::.....|..| :.|.|  ..:|..|| .|.:.||.:|..||...|
Zfish   216 VLVTAHIGQFFFMQDCPYQFPVFLYIIG-LYGLIFLLLFLHFYYHAY 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:279492 87/216 (40%)
elovl7bNP_956072.1 ELO 30..228 CDD:279492 79/197 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 1 1.000 - - FOG0000078
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.