DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Elo68beta and Elovl4

DIOPT Version :9

Sequence 1:	NP_001097580.1	Gene:	Elo68beta / 39245	FlyBaseID:	FBgn0036128	Length:	269	Species:	Drosophila melanogaster
Sequence 2:	NP_001178725.1	Gene:	Elovl4 / 315851	RGDID:	1305630	Length:	314	Species:	Rattus norvegicus

Alignment Length:	257	Identity:	118/257 - (45%)
Similarity:	170/257 - (66%)	Gaps:	2/257 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 SSMGNDTKTESYSYPFADLADERTQDWPLVKSPWNIIALLALYLLMVRYAPKWTARCKPLQLRVP 67
            |:..||| .|.|.:.:: :||:|.:||||::|||..:::..||||.|...|||....:|.|:|:.
  Rat    16 STAFNDT-VEFYRWTWS-IADKRVEDWPLMQSPWPTLSISTLYLLFVWLGPKWMKDREPFQMRLV 78

  Fly    68 LFCHSLAMIFLNGYICLEFLTASLSLGYNFACQECRVSHDPHEIRIAAAMWWFYISKILEFVDTA 132
            |..::..|:.||.:|..|....|.:.||::.||....|:|.:|:|||||:||:::||.:|::||.
  Rat    79 LIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNDVNEVRIAAALWWYFVSKGVEYLDTV 143

  Fly   133 FFILRHKWNQLSFLHVYHHSTMFLFCWTYVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRV 197
            |||||.|.||:||||||||.|||...|..:||:..|..||.:.:|||:||||||||.|:..||.:
  Rat   144 FFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLTAFGPWI 208

  Fly   198 QRFLWWKRYLTGLQLVQFTIIFFWASQLVFRGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKY 259
            |::||||||||.||||||.:.....:..::..|.:.||:.....||.:.|:|:|..||.:.|
  Rat   209 QKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTY 270

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Elo68beta	NP_001097580.1	ELO	48..267	CDD:279492	98/212 (46%)
Elovl4	NP_001178725.1	ELO	41..278	CDD:395916	107/230 (47%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166352906
Domainoid	1	1.000	238	1.000	Domainoid score	I2222
eggNOG	1	0.900	-	-		E1_KOG3071
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	257	1.000	Inparanoid score	I3071
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1094172at2759
OrthoFinder	1	1.000	-	-		FOG0000078
OrthoInspector	1	1.000	-	-		mtm8964
orthoMCL	1	0.900	-	-		OOG6_100254
Panther	1	1.100	-	-	LDO	PTHR11157
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X54
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.760