DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68beta and Elovl4

DIOPT Version :10

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001178725.1 Gene:Elovl4 / 315851 RGDID:1305630 Length:314 Species:Rattus norvegicus


Alignment Length:257 Identity:118/257 - (45%)
Similarity:170/257 - (66%) Gaps:2/257 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSMGNDTKTESYSYPFADLADERTQDWPLVKSPWNIIALLALYLLMVRYAPKWTARCKPLQLRVP 67
            |:..||| .|.|.:.:: :||:|.:||||::|||..:::..||||.|...|||....:|.|:|:.
  Rat    16 STAFNDT-VEFYRWTWS-IADKRVEDWPLMQSPWPTLSISTLYLLFVWLGPKWMKDREPFQMRLV 78

  Fly    68 LFCHSLAMIFLNGYICLEFLTASLSLGYNFACQECRVSHDPHEIRIAAAMWWFYISKILEFVDTA 132
            |..::..|:.||.:|..|....|.:.||::.||....|:|.:|:|||||:||:::||.:|::||.
  Rat    79 LIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNDVNEVRIAAALWWYFVSKGVEYLDTV 143

  Fly   133 FFILRHKWNQLSFLHVYHHSTMFLFCWTYVKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRV 197
            |||||.|.||:||||||||.|||...|..:||:..|..||.:.:|||:||||||||.|:..||.:
  Rat   144 FFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLTAFGPWI 208

  Fly   198 QRFLWWKRYLTGLQLVQFTIIFFWASQLVFRGCEYGKWLTPIGAAYMVPFLFMFGRFYAQKY 259
            |::||||||||.||||||.:.....:..::..|.:.||:.....||.:.|:|:|..||.:.|
  Rat   209 QKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYTRTY 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:460083 98/212 (46%)
Elovl4NP_001178725.1 ELO 41..278 CDD:460083 107/230 (47%)

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