DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68beta and Elovl3

DIOPT Version :10

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001101072.1 Gene:Elovl3 / 309449 RGDID:1307263 Length:271 Species:Rattus norvegicus


Alignment Length:281 Identity:82/281 - (29%)
Similarity:130/281 - (46%) Gaps:48/281 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSSM--GNDTKTESYS-YPFADLADERTQDW-PLVKSPW-NIIALLALYLLMVRYAPKWTARCK 60
            |.:||  ....|||... |.|     |.:||. |.::..| :...::.:|||::.:...:....|
  Rat     1 MDTSMNFSRGLKTELIQPYDF-----EMSQDLRPFLEEYWVSSFFIVLVYLLLIIFGQNYMKTRK 60

  Fly    61 PLQLRVPL----FCHSLAMIFLNGYICL-EFL-TASLSLGYNFACQECRVSHDPHEIRIAAAMWW 119
            ...|:.||    ||  ||:..:.|.:.: :|: |...::|..   |....:...::..:....|.
  Rat    61 GFSLQRPLILWSFC--LAIFSILGTLRMWKFMGTVLFTMGLK---QTVCFTDYTNDAIVKFWSWV 120

  Fly   120 FYISKILEFVDTAFFILRHKWNQLSFLHVYHHSTMFLF-CWTYVKWLPTGSTFFPSMINSFVHVI 183
            |.:||::|..||||.|||.:  .|.|:|.|||||:.|| .:.|...:|:|..|.  .:|..||.:
  Rat   121 FLLSKVVELGDTAFIILRKR--PLIFVHWYHHSTVLLFTSFGYKNKVPSGGWFM--TMNLGVHSV 181

  Fly   184 MYSYY---ALSVLGPRVQRFLWWKRYLTGLQLVQ------FTII-FFWASQLVFRGC----EYGK 234
            ||:||   |..|..|.:...:     :|.||::|      |.|: :.|..:   |||    |:..
  Rat   182 MYTYYTMKAAKVKHPNILPMV-----ITSLQILQMVLGTIFGILNYIWRQE---RGCYTTSEHFF 238

  Fly   235 WLTPIGAAYMVPFLFMFGRFY 255
            |...:...|.:.|...|.|.|
  Rat   239 WSFVLYGTYFILFAQFFHRAY 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:460083 66/229 (29%)
Elovl3NP_001101072.1 ELO 30..266 CDD:460083 70/247 (28%)

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