DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68beta and elo1

DIOPT Version :10

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_592859.3 Gene:elo1 / 2543177 PomBaseID:SPAC1639.01C Length:365 Species:Schizosaccharomyces pombe


Alignment Length:258 Identity:70/258 - (27%)
Similarity:107/258 - (41%) Gaps:44/258 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IIALLALYLLMVRYAPKWTARCKPLQLRVPLFCHSLAMIFLNGYICL----EFLTASLSLGYNFA 98
            :..::..|.|::....:.....:|::|:.....::|.....:..:.|    :...|....|:.|:
pombe    75 VATIIISYYLLILVGGRIMRNRQPIRLQKIFQYYNLTFSIASAILALLIFEQVAPAIYKHGFFFS 139

  Fly    99 -CQECRVSHDPHEIRIAAAMWWFYISKILEFVDTAFFILRHKWNQLSFLHVYHHSTMFLFCWTY- 161
             |.| :....|    :....:..||||.||..||.|.:||.|  .|.|||.|||....:..:|. 
pombe   140 ICNE-KAWTQP----LVFLYYCAYISKFLELTDTFFLVLRKK--PLQFLHCYHHGATAVLVYTQI 197

  Fly   162 -----VKWLPTGSTFFPSMINSFVHVIMYSYYALSVLGPRVQRFLWWKRYLTGLQLVQF-----T 216
                 :.||..       .||..|||.||.||.|...|.||.    ||:::|..|:|||     .
pombe   198 VGRTSISWLII-------EINLLVHVTMYYYYYLVAKGIRVP----WKKWVTRFQIVQFFADLGF 251

  Fly   217 IIFFWASQLVFR---------GCEYGKWLTPIGAAYMVPFLFMFGRFYAQKYCVSAVVK-KAK 269
            |.|...:::.:|         .|.........|.|.:..:|.:|..||...|..:|.:| |||
pombe   252 IYFAVYTEVAYRLKFYKACMGHCSGHPLAAFCGLATISSYLVLFIVFYHNTYKKNAALKMKAK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:460083 65/244 (27%)
elo1NP_592859.3 ELO 69..303 CDD:460083 64/245 (26%)

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