DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elo68beta and elo-4

DIOPT Version :9

Sequence 1:NP_001097580.1 Gene:Elo68beta / 39245 FlyBaseID:FBgn0036128 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_499056.1 Gene:elo-4 / 183367 WormBaseID:WBGene00001242 Length:291 Species:Caenorhabditis elegans


Alignment Length:282 Identity:74/282 - (26%)
Similarity:125/282 - (44%) Gaps:50/282 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SYSYPFADLADERTQDWPLV--KSPWNIIALLALYLLMVRYAPKWTARCKPLQLRVPLFCHSLAM 75
            ||.:|...:||  .|.|.::  |..::.|.:..||.::::...|:....||..|:.||       
 Worm    30 SYHFPGEQVAD--PQYWTILFQKYWYHSITISVLYFILIKVIQKFMENRKPFTLKYPL------- 85

  Fly    76 IFLNGYICLEFLTASLSLG------------YNFACQECRVSHDPHEIRIAAAMW--WFYISKIL 126
            |..||.:....:.|:|...            |...|..|    :|.::   ||.|  .|.:|||:
 Worm    86 ILWNGALAAFSIIATLRFSIDPLRSLYAEGFYKTLCYSC----NPTDV---AAFWSFAFALSKIV 143

  Fly   127 EFVDTAFFILRHKWNQLSFLHVYHHSTMFLFCWTYVKWLPTGSTFFPSMINSFVHVIMYSYYALS 191
            |..||.|.|||.:  .|.|||.|||:.:.::. .:.....|.:..|..::|.|.|.:||:||.:|
 Worm   144 ELGDTMFIILRKR--PLIFLHYYHHAAVLIYT-VHSGAEHTAAGRFYILMNYFAHSLMYTYYTVS 205

  Fly   192 VLGPRVQRFLWWKRYLTGLQLVQFT--IIFFWASQLVFR-------GCEYGKWLTPIGAAYMVPF 247
            .:|.|:.:  |....:|.:|..|..  :...|   :|::       .|:.......:.....|.|
 Worm   206 AMGYRLPK--WVSMTVTTVQTTQMLAGVGITW---MVYKVKTEYKLPCQQSVANLYLAFVIYVTF 265

  Fly   248 LFMFGRFYAQKYCVSAVVKKAK 269
            ..:|.:|:.:.|.:.: .||:|
 Worm   266 AILFIQFFVKAYIIKS-SKKSK 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elo68betaNP_001097580.1 ELO 48..267 CDD:279492 60/241 (25%)
elo-4NP_499056.1 ELO 48..278 CDD:279492 63/251 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1820
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.770

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